Evidence map›Paper›PMID 34210974›Full record

ArticleNature communications2021

Fluid flow-induced left-right asymmetric decay of Dand5 mRNA in the mouse embryo requires a Bicc1-Ccr4 RNA degradation complex.

Katsura Minegishi, Benjamin Rothé, Kaoru R Komatsu, Hiroki Ono, Yayoi Ikawa, Hiromi Nishimura, Takanobu A Katoh, Eriko Kajikawa, Xiaorei Sai, Emi Miyashita and 7 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
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  3. Science advances · 2026
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  8. Review
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  13. mRNA (New York, N.Y.) · 2025
    Article
  14. BMP4 regulates asymmetric Pkd2 distribution in mouse nodal immotile cilia and ciliary mechanosensing required for left-right determination.Developmental dynamics : an official publication of the American Association of Anatomists · 2025
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Katsura Minegishi *Laboratory for Organismal Patterning, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan.ORCID 0000-0003-1567-2339
Benjamin Rothé *Ecole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, Lausanne, Switzerland.
Kaoru R Komatsu *Department of Life Science Frontiers, Center for iPS Cell Research and Application (CiRA), Kyoto University, Kyoto, Japan.ORCID 0000-0002-4505-0840
Hiroki OnoDepartment of Life Science Frontiers, Center for iPS Cell Research and Application (CiRA), Kyoto University, Kyoto, Japan.
Yayoi IkawaLaboratory for Organismal Patterning, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan.
Hiromi NishimuraLaboratory for Organismal Patterning, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan.ORCID 0000-0002-9779-8236
Takanobu A KatohLaboratory for Organismal Patterning, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan.ORCID 0000-0002-9966-6798
Eriko KajikawaLaboratory for Organismal Patterning, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan.
Xiaorei SaiLaboratory for Organismal Patterning, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan.
Emi MiyashitaDepartment of Life Science Frontiers, Center for iPS Cell Research and Application (CiRA), Kyoto University, Kyoto, Japan.
Katsuyoshi TakaokaLaboratory for Organismal Patterning, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan.
Kana BandoLaboratory for Animal Resources and Genetic Engineering, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan.
Hiroshi KiyonariLaboratory for Animal Resources and Genetic Engineering, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan.ORCID 0000-0002-1509-8747
Tadashi YamamotoLaboratory for Immunogenetics, Center for Integrative Medical Sciences, Suehiro-cho, Yokohama, Japan.ORCID 0000-0002-5938-9378
Hirohide SaitoDepartment of Life Science Frontiers, Center for iPS Cell Research and Application (CiRA), Kyoto University, Kyoto, Japan. hirohide.saito@cira.kyoto-u.ac.jp.ORCID 0000-0002-8570-5784
Daniel B ConstamEcole Polytechnique Fédérale de Lausanne (EPFL), School of Life Sciences, Lausanne, Switzerland. daniel.constam@epfl.ch.ORCID 0000-0002-6256-3891
Hiroshi HamadaLaboratory for Organismal Patterning, RIKEN Center for Biosystems Dynamics Research, Kobe, Hyogo, Japan. hiroshi.hamada@riken.jp.ORCID 0000-0002-7196-5948
RIKEN Center for Biosystems Dynamics Research · JPKyoto University · JPÉcole Polytechnique Fédérale de Lausanne · CHOkinawa Institute of Science and Technology Graduate University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular left-right (L-R) asymmetry is established at the node of the mouse embryo as a result of the sensing of a leftward fluid flow by immotile cilia of perinodal crown cells and the consequent degradation of Dand5 mRNA on the left side. We here examined how the fluid flow induces Dand5 mRNA decay. We found that the first 200 nucleotides in the 3' untranslated region (3'-UTR) of Dand5 mRNA are necessary and sufficient for the left-sided decay and to mediate the response of a 3'-UTR reporter transgene to Ca

Indexed as

3' Untranslated RegionsAnimalsEmbryo, MammalianGene Expression Regulation, DevelopmentalIntercellular Signaling Peptides and ProteinsMiceMice, KnockoutReceptors, CCR4RNA-Binding ProteinsRNA, MessengerRNA StabilityTranscription FactorsTRPP Cation Channels3' Untranslated RegionsBicc1 protein, mouseCcr4 protein, mouseCNOT3 protein, mouseDte protein, mouseIntercellular Signaling Peptides and ProteinsReceptors, CCR4RNA-Binding ProteinsRNA, MessengerTranscription FactorsTRPP Cation Channels

Identifiers

PMID34210974
PMCPMC8249388
OpenAlexW3175718997

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.