Evidence map›Paper›PMID 34210797›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Tryptophan-metabolizing gut microbes regulate adult neurogenesis via the aryl hydrocarbon receptor.

George Zhang Wei, Katherine A Martin, Peter Yuli Xing, Ruchi Agrawal, Luke Whiley, Thomas K Wood, Sophia Hejndorf, Yong Zhi Ng, Jeremy Zhi Yan Low, Janet Rossant and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
116citing papers in PubMed, 1 pooled it
14.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

116 citing papers in PubMed, 1 synthesis or guideline pooled it, 186 citations in OpenAlex.

  1. The microbiota-gut- hippocampus axis.Frontiers in neuroscience · 2022
    Pooled it
  2. Review
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  4. Article
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  6. Formic acid released by intratumoralActa pharmaceutica Sinica. B · 2026
    Article
  7. mSystems · 2026
    Article
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56 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 7 countries.

George Zhang WeiLee Kong Chian School of Medicine, Nanyang Technological University, Singapore 636921.
Katherine A MartinLee Kong Chian School of Medicine, Nanyang Technological University, Singapore 636921.ORCID 0000-0001-8034-2745
Peter Yuli XingThe Singapore Centre for Environmental Life Sciences Engineering, School of Biological Sciences, Nanyang Technological University, Singapore 637551.ORCID 0000-0002-3066-2342
Ruchi AgrawalThe Singapore Centre for Environmental Life Sciences Engineering, School of Biological Sciences, Nanyang Technological University, Singapore 637551.
Luke WhileyAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth WA 6150, Australia.ORCID 0000-0002-9088-4799
Thomas K WoodDepartment of Chemical Engineering, Pennsylvania State University, University Park, PA 16802.ORCID 0000-0002-6258-529X
Sophia HejndorfDepartment of Neurobiology, Care and Society, Karolinska Institutet, 171 77 Stockholm, Sweden.ORCID 0000-0002-2539-2413
Yong Zhi NgThe School of Biological Sciences, Nanyang Technological University, Singapore 637551.ORCID 0000-0003-2228-2021
Jeremy Zhi Yan LowLee Kong Chian School of Medicine, Nanyang Technological University, Singapore 636921.ORCID 0000-0003-3590-3421
Janet RossantProgram in Developmental and Stem Cell Biology, Peter Gilgan Centre for Research and Learning, Hospital for Sick Children, Toronto, ON M5G 0A4, Canada.ORCID 0000-0002-3731-5466
Robert NechanitzkyPrincess Margaret Cancer Centre, University Health Network, University of Toronto, Toronto, ON M5G 2C1, Canada.
Elaine HolmesAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth WA 6150, Australia.
Jeremy K NicholsonAustralian National Phenome Centre, Health Futures Institute, Murdoch University, Perth WA 6150, Australia.ORCID 0000-0002-8123-8349
Eng-King TanNational Neuroscience Institute, Singapore 169857.
Paul M MatthewsLee Kong Chian School of Medicine, Nanyang Technological University, Singapore 636921.ORCID 0000-0002-1619-8328
Sven PetterssonLee Kong Chian School of Medicine, Nanyang Technological University, Singapore 636921; sven.pettersson@ki.se.ORCID 0000-0001-8903-3738
Nanyang Technological University · SGMurdoch University · AUHospital for Sick Children · CAKarolinska Institutet · SENational Neuroscience Institute · SGPennsylvania State University · USUniversity Health Network · CA

Funding

Medical Research Council G0100811Medical Research Council G0300665Medical Research Council G0601966Medical Research Council G0900897Medical Research Council G9409531Medical Research Council G9409634Medical Research Council G9901399Medical Research Council MC_PC_17114Medical Research Council MR/K501013/1Medical Research Council MR/M024903/1Medical Research Council MR/N026934/1
6 · The paper itself

Abstract

While modulatory effects of gut microbes on neurological phenotypes have been reported, the mechanisms remain largely unknown. Here, we demonstrate that indole, a tryptophan metabolite produced by tryptophanase-expressing gut microbes, elicits neurogenic effects in the adult mouse hippocampus. Neurogenesis is reduced in germ-free (GF) mice and in GF mice monocolonized with a single-gene

Indexed as

Gastrointestinal MicrobiomeNeurogenesisAgingAnimalsIndolesMaleMiceMice, Inbred C57BLMice, KnockoutMutationNeural Stem CellsReceptors, Aryl HydrocarbonTryptophanindoleIndolesReceptors, Aryl HydrocarbonTryptophanaryl hydrocarbon receptorindolemicrobiotaneurogenesistryptophan metabolism

Identifiers

PMID34210797
PMCPMC8271728
OpenAlexW3174403046

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.