Evidence map›Paper›PMID 34209398›Full record

ArticleMicroorganisms2021

Extremophiles in Soil Communities of Former Copper Mining Sites of the East Harz Region (Germany) Reflected by Re-Analyzed 16S rRNA Data.

J Michael Köhler, Nancy Beetz, Peter Mike Günther, Frances Möller, Jialan Cao

Abstract read
In one paragraph

Article in Microorganisms, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

J Michael KöhlerDepartment of Physical Chemistry and Microreaction Technology, Institute for Micro and Nanotechnologies/Institute for Chemistry and Biotechnology, Technical University Ilmenau, 98693 Ilmenau, Germany.ORCID 0000-0002-6884-5902
Nancy BeetzDepartment of Physical Chemistry and Microreaction Technology, Institute for Micro and Nanotechnologies/Institute for Chemistry and Biotechnology, Technical University Ilmenau, 98693 Ilmenau, Germany.
Peter Mike GüntherDepartment of Physical Chemistry and Microreaction Technology, Institute for Micro and Nanotechnologies/Institute for Chemistry and Biotechnology, Technical University Ilmenau, 98693 Ilmenau, Germany.
Frances MöllerDepartment of Physical Chemistry and Microreaction Technology, Institute for Micro and Nanotechnologies/Institute for Chemistry and Biotechnology, Technical University Ilmenau, 98693 Ilmenau, Germany.
Jialan CaoDepartment of Physical Chemistry and Microreaction Technology, Institute for Micro and Nanotechnologies/Institute for Chemistry and Biotechnology, Technical University Ilmenau, 98693 Ilmenau, Germany.ORCID 0000-0001-5568-7258

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The east and southeast rim of Harz mountains (Germany) are marked by a high density of former copper mining places dating back from the late 20th century to the middle age. A set of 18 soil samples from pre- and early industrial mining places and one sample from an industrial mine dump have been selected for investigation by 16S rRNA and compared with six samples from non-mining areas. Although most of the soil samples from the old mines show pH values around 7, RNA profiling reflects many operational taxonomical units (OTUs) belonging to acidophilic genera. For some of these OTUs, similarities were found with their abundances in the comparative samples, while others show significant differences. In addition to pH-dependent bacteria, thermophilic, psychrophilic, and halophilic types were observed. Among these OTUs, several DNA sequences are related to bacteria which are reported to show the ability to metabolize special substrates. Some OTUs absent in comparative samples from limestone substrates, among them

Indexed as

acidophilesancient mining placeshalophilesNGSpsychrophilessoil bacteriathermophiles

Identifiers

PMID34209398
PMCPMC8305195

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.