Evidence map›Paper›PMID 34208061›Full record

ArticlePathogens (Basel, Switzerland)2021

Multi-Epitope Vaccine Design Using an Immunoinformatic Approach for SARS-CoV-2.

Ye Feng, Haiping Jiang, Min Qiu, Liang Liu, Shengmei Zou, Yun Li, Qianpeng Guo, Ning Han, Yingqiang Sun, Kui Wang and 5 more

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. BCEDB: a linear B-cell epitopes database for SARS-CoV-2.Database : the journal of biological databases and curation · 2023
    Article
  12. Article
  13. Review
  14. Article
  15. COVID-19 Vaccines: Computational tools and Development.Informatics in medicine unlocked · 2023
    Review
  16. Article
  17. Peptides for Vaccine Development.ACS applied bio materials · 2022
    Review
  18. Article
  19. Predicting epitopes for vaccine development using bioinformatics tools.Therapeutic advances in vaccines and immunotherapy · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Ye FengSir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou 310001, China.ORCID 0000-0002-6551-1560
Haiping JiangThe First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310007, China.ORCID 0000-0002-4394-6176
Min QiuHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.
Liang LiuHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.
Shengmei ZouSir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou 310001, China.
Yun LiZhejiang Forest Resources Monitoring Center, Hangzhou 310020, China.
Qianpeng GuoHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.
Ning HanHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.
Yingqiang SunHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.
Kui WangHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.
Lantian LuHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.
Xinlei ZhuangCollege of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, China.
Shanshan ZhangHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.
Shuqing ChenHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.ORCID 0000-0002-0792-3735
Fan MoHangzhou Neoantigen Therapeutics Co., Ltd., Hangzhou 310058, China.
Zhejiang University · CNSir Run Run Shaw Hospital · CNFirst Affiliated Hospital Zhejiang University · CNUniversity of British Columbia · CAZhejiang Environmental Monitoring Center · CN

Funding

National Health and Family Planning Commission Research Fund & Zhejiang Provincial Medical and Health Major Science and Technology Plan Project KWJ-ZJ-2108Public Welfare Technology Application Research Project of Zhejiang Province LGF20E030004
6 · The paper itself

Abstract

Through 4 June 2021, COVID-19 has caused over 172.84 million cases of infection and 3.71 million deaths worldwide. Due to its rapid dissemination and high mutation rate, it is essential to develop a vaccine harboring multiple epitopes and efficacious against multiple variants to prevent the immune escape of SARS-CoV-2. An in silico approach based on the viral genome was applied to identify 19 high-immunogenic B-cell epitopes and 499 human leukocyte antigen (HLA)-restricted T-cell epitopes. Thirty multi-epitope peptide vaccines were designed by iNeo-Suite and manufactured by solid-phase synthesis. Docking analysis confirmed stable hydrogen bonds of epitopes with their corresponding HLA alleles. When four peptide candidates derived from the spike protein of SARS-CoV-2 were selected to immunize mice, a significantly larger amount of total IgG in serum, as well as an increase of CD19+ cells in the inguinal lymph nodes, were observed in the peptide-immunized mice compared to the control. The ratios of IFN-γ-secreting lymphocytes in CD4+ or CD8+ T-cells in the peptide-immunized mice were higher than those in the control mice. There were also a larger number of IFN-γ-secreting T-cells in the spleens of peptide-immunized mice. The peptide vaccines in this study successfully elicited antigen-specific humoral and cellular immune responses in mice. To further validate the safety and efficacy of this vaccine, animal studies using a primate model, as well as clinical trials in humans, are required.

Indexed as

COVID-19epitopeimmunoinformaticspeptideSARS-CoV-2vaccine

Identifiers

PMID34208061
PMCPMC8230658
OpenAlexW3169241884

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.