Evidence map›Paper›PMID 34206406›Full record

ArticleMolecules (Basel, Switzerland)2021

High-Throughput Fluorescent Assay for Inhibitor Screening of Proteases from RNA Viruses.

Bara Cihlova, Andrea Huskova, Jiri Böserle, Radim Nencka, Evzen Boura, Jan Silhan

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Bara CihlovaInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo namesti 2, 166 10 Prague 6, Czech Republic.
Andrea HuskovaInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo namesti 2, 166 10 Prague 6, Czech Republic.
Jiri BöserleInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo namesti 2, 166 10 Prague 6, Czech Republic.
Radim NenckaInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo namesti 2, 166 10 Prague 6, Czech Republic.
Evzen BouraInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo namesti 2, 166 10 Prague 6, Czech Republic.
Jan SilhanInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo namesti 2, 166 10 Prague 6, Czech Republic.ORCID 0000-0003-3868-5714
Czech Academy of Sciences, Institute of Organic Chemistry and Biochemistry · CZ

Funding

Akademie Věd České Republiky RVO: 61388963European Regional Development Fund CZ.02.1.01/0.0/0.0/16_019/0000729
6 · The paper itself

Abstract

Spanish flu, polio epidemics, and the ongoing COVID-19 pandemic are the most profound examples of severe widespread diseases caused by RNA viruses. The coronavirus pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) demands affordable and reliable assays for testing antivirals. To test inhibitors of viral proteases, we have developed an inexpensive high-throughput assay based on fluorescent energy transfer (FRET). We assayed an array of inhibitors for papain-like protease from SARS-CoV-2 and validated it on protease from the tick-borne encephalitis virus to emphasize its versatility. The reaction progress is monitored as loss of FRET signal of the substrate. This robust and reproducible assay can be used for testing the inhibitors in 96- or 384-well plates.

Indexed as

Antiviral AgentsCoronavirus Papain-Like ProteasesCOVID-19 Drug TreatmentDEAD-box RNA HelicasesDrug Evaluation, PreclinicalEncephalitis Viruses, Tick-BorneFluorescence Resonance Energy TransferFluorescent DyesHigh-Throughput Screening AssaysHumansNucleoside-TriphosphataseProtease InhibitorsRNA HelicasesRNA VirusesSARS-CoV-2Serine EndopeptidasesAntiviral AgentsCoronavirus Papain-Like ProteasesDEAD-box RNA HelicasesFluorescent DyesNS3 protein, flavivirusNucleoside-Triphosphatasepapain-like protease, SARS-CoV-2Protease InhibitorsRNA HelicasesSerine EndopeptidasesViral Nonstructural ProteinsViral Proteasesdiscoverydrugflavivirushigh-throughput screeningpapain-likeproteaseSARS-CoV-2TBEVvirus

Identifiers

PMID34206406
PMCPMC8270262
OpenAlexW3177340963

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.