Evidence map›Paper›PMID 34205906›Full record

ArticlePlants (Basel, Switzerland)2021

Genome-Wide Association Analysis for Stem Cross Section Properties, Height and Heading Date in a Collection of Spanish Durum Wheat Landraces.

Carmen M Ávila, María Dolores Requena-Ramírez, Cristina Rodríguez-Suárez, Fernando Flores, Josefina C Sillero, Sergio G Atienza

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Identifying marker-trait associations for wheat stem sawfly resistance.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Fine mapping and genetic analysis identified a CTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Carmen M ÁvilaÁrea Genómica y Biotecnología, Instituto Andaluz de Investigación y Formación Agraria, Pesquera, Alimentaria y de la Producción Ecológia-Centro Alameda del Obispo, Apdo. 3092, 14080 Córdoba, Spain.
María Dolores Requena-RamírezInstituto de Agricultura Sostenible (CSIC), Alameda del Obispo, S/N, 14004 Córdoba, Spain.ORCID 0000-0002-4981-561X
Cristina Rodríguez-SuárezInstituto de Agricultura Sostenible (CSIC), Alameda del Obispo, S/N, 14004 Córdoba, Spain.ORCID 0000-0002-5409-1839
Fernando FloresDepartamento de Ciencias Agroforestales, E.T.S.I. Campus El Carmen, Universidad de Huelva, Avda. Fuerzas Armadas, S/N, 21007 Huelva, Spain.ORCID 0000-0002-5247-2267
Josefina C SilleroÁrea Genómica y Biotecnología, Instituto Andaluz de Investigación y Formación Agraria, Pesquera, Alimentaria y de la Producción Ecológia-Centro Alameda del Obispo, Apdo. 3092, 14080 Córdoba, Spain.
Sergio G AtienzaInstituto de Agricultura Sostenible (CSIC), Alameda del Obispo, S/N, 14004 Córdoba, Spain.ORCID 0000-0001-5175-8303

Funding

European Regional Development Fund AVA2019.020Instituto de Investigación y Formación Agraria y Pesquera (IFAPA), Junta de Andalucía AVA2019.020Ministerio de Ciencia, Innovación y Universidades PRE2018-084037
6 · The paper itself

Abstract

Durum wheat landraces have a high potential for breeding but they remain underexploited due to several factors, including the insufficient evaluation of these plant materials and the lack of efficient selection tools for transferring target traits into elite backgrounds. In this work, we characterized 150 accessions of the Spanish durum wheat collection for stem cross section, height and heading date. Continuous variation and high heritabilities were recorded for the stem area, pith area, pith diameter, culm wall thickness, height and heading date. The accessions were genotyped with DArTSeq markers, which were aligned to the durum wheat 'Svevo' genome. The markers corresponding to genes, with a minor allele frequency above 5% and less than 10% of missing data, were used for genome-wide association scan analysis. Twenty-nine marker-trait associations (MTAs) were identified and compared with the positions of previously known QTLs. MTAs for height and heading date co-localized with the QTLs for these traits. In addition, all the MTAs for stem traits in chromosome 2B were located in the corresponding synteny regions of the markers associated with lodging in bread wheat. Finally, several MTAs for stem traits co-located with the QTL for wheat stem sawfly (WSS) resistance. The results presented herein reveal the same genomic regions in chromosome 2B are involved in the genetic control of stem traits and lodging tolerance in both durum and bread wheat. In addition, these results suggest the importance of stem traits for WSS resistance and the potential of these landraces as donors for lodging tolerance and WSS resistance enhancement. In this context, the MTAs for stem-related traits identified in this work can serve as a reference for further development of markers for the introgression of target traits into elite material.

Indexed as

DArTSeqdurum wheatlodgingstemWSS

Identifiers

PMID34205906
PMCPMC8230085

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.