Evidence map›Paper›PMID 34205418›Full record

ArticleInternational journal of molecular sciences2021

Transcriptional Stress Induces Chromatin Relocation of the Nucleotide Excision Repair Factor XPG.

Claudia Scalera, Giulio Ticli, Ilaria Dutto, Ornella Cazzalini, Lucia A Stivala, Ennio Prosperi

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. XPG: a multitasking genome caretaker.Cellular and molecular life sciences : CMLS · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Claudia ScaleraIstituto di Genetica Molecolare "Luigi Luca Cavalli-Sforza", Consiglio Nazionale Delle Ricerche (CNR), Via Abbiategrasso 207, 27100 Pavia, Italy.
Giulio TicliIstituto di Genetica Molecolare "Luigi Luca Cavalli-Sforza", Consiglio Nazionale Delle Ricerche (CNR), Via Abbiategrasso 207, 27100 Pavia, Italy.ORCID 0000-0003-4251-7385
Ilaria DuttoIstituto di Genetica Molecolare "Luigi Luca Cavalli-Sforza", Consiglio Nazionale Delle Ricerche (CNR), Via Abbiategrasso 207, 27100 Pavia, Italy.ORCID 0000-0002-6987-6647
Ornella CazzaliniDipartimento di Medicina Molecolare, Università di Pavia, Via Ferrata 9, 27100 Pavia, Italy.
Lucia A StivalaDipartimento di Medicina Molecolare, Università di Pavia, Via Ferrata 9, 27100 Pavia, Italy.
Ennio ProsperiIstituto di Genetica Molecolare "Luigi Luca Cavalli-Sforza", Consiglio Nazionale Delle Ricerche (CNR), Via Abbiategrasso 207, 27100 Pavia, Italy.ORCID 0000-0001-5391-5157
Istituto di Genetica Molecolare · ITUniversity of Pavia · IT

Funding

Associazione Italiana per la Ricerca sul Cancro 17041MIUR initiative "Dipartimenti di eccellenza" 2018.2022
6 · The paper itself

Abstract

Endonuclease XPG participates in nucleotide excision repair (NER), in basal transcription, and in the processing of RNA/DNA hybrids (R-loops): the malfunction of these processes may cause genome instability. Here, we investigate the chromatin association of XPG during basal transcription and after transcriptional stress. The inhibition of RNA polymerase II with 5,6-dichloro-l-β-D-ribofuranosyl benzimidazole (DRB), or actinomycin D (AD), and of topoisomerase I with camptothecin (CPT) resulted in an increase in chromatin-bound XPG, with concomitant relocation by forming nuclear clusters. The cotranscriptional activators p300 and CREB-binding protein (CREBBP), endowed with lysine acetyl transferase (KAT) activity, interact with and acetylate XPG. Depletion of both KATs by RNA interference, or chemical inhibition with C646, significantly reduced XPG acetylation. However, the loss of KAT activity also resulted in increased chromatin association and the relocation of XPG, indicating that these processes were induced by transcriptional stress and not by reduced acetylation. Transcription inhibitors, including C646, triggered the R-loop formation and phosphorylation of histone H2AX (γ-H2AX). Proximity ligation assay (PLA) showed that XPG colocalized with R-loops, indicating the recruitment of the protein to these structures. These results suggest that transcriptional stress-induced XPG relocation may represent recruitment to sites of R-loop processing.

Indexed as

DNA RepairAcetylationCell LineChromatinDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EndonucleasesHistonesHumansNuclear ProteinsR-Loop StructuresTranscription FactorsChromatinDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EndonucleasesH2AX protein, humanHistonesNuclear ProteinsTranscription Factorsacetylationchromatin associationgenome instabilityp300/CREBBPR loopXPG endonuclease

Identifiers

PMID34205418
PMCPMC8235791
OpenAlexW3176761463

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.