Evidence map›Paper›PMID 34205093›Full record

ArticleViruses2021

Comparative Molecular Characterization of Novel and Known Piscine Toti-Like Viruses.

Liv Sandlund, Sunil K Mor, Vikash K Singh, Soumesh K Padhi, Nicholas B D Phelps, Stian Nylund, Aase B Mikalsen

Open access · goldAbstract readComparative Study
In one paragraph

Article in Viruses, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  7. Evaluating Atlantic Salmon (Pathogens (Basel, Switzerland) · 2024
    Article
  8. Review
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  11. Transcriptomic response of lumpfish (Frontiers in immunology · 2024
    Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Liv SandlundPharmaq Analytiq, 5008 Bergen, Norway.
Sunil K MorVeterinary Diagnostic Laboratory, Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN 55108-6074, USA.ORCID 0000-0002-1112-088X
Vikash K SinghVeterinary Diagnostic Laboratory, Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN 55108-6074, USA.
Soumesh K PadhiDepartment of Fisheries, Wildlife and Conservation Biology, College of Food, Agriculture and Natural Resource Sciences, University of Minnesota, St. Paul, MN 55108-6074, USA.ORCID 0000-0002-1017-5838
Nicholas B D PhelpsDepartment of Fisheries, Wildlife and Conservation Biology, College of Food, Agriculture and Natural Resource Sciences, University of Minnesota, St. Paul, MN 55108-6074, USA.ORCID 0000-0003-3116-860X
Stian NylundPharmaq Analytiq, 5008 Bergen, Norway.
Aase B MikalsenDepartment of Paraclinical Sciences, Faculty of Veterinary Medicine, Norwegian University of Life Sciences, 1432 Ås, Norway.ORCID 0000-0001-6367-9629
University of Minnesota · USPharmaq (Norway) · NONorwegian University of Life Sciences · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Totiviridae is a virus family well known to infect uni-cellular organisms like fungi and protozoa. In more recent years, viruses characterized as toti-like viruses, have been found in primarily arthropods, but also a couple in planarians and piscine species. These toti-like viruses share phylogenetic similarities to totiviruses; however, their genomes also includes additional coding sequences in either 5' or 3' ends expected to relate to more advanced infection mechanisms in more advanced hosts. Here, we applied next generation sequencing (NGS) technologies and discovered three new toti-like viruses, one in wild common carp and one in bluegill from the USA and one in farmed lumpsucker from Norway. These are named common carp toti-like virus 1 (CCTLV-1), bluegill toti-like virus 1 (BGTLV-1), and

Indexed as

Genome, ViralAnimalsCluster AnalysisCyprinidaeFish DiseasesHigh-Throughput Nucleotide SequencingOpen Reading FramesPhylogenyRNA, ViralTotiviridaeRNA, Viralgenomic characterizationphylogenypiscinetoti-like virusesTotiviridae

Identifiers

PMID34205093
PMCPMC8229945
OpenAlexW3171790786

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.