Evidence map›Paper›PMID 34203905›Full record

ArticleCancers2021

Next Generation Cytogenetics in Myeloid Hematological Neoplasms: Detection of CNVs and Translocations.

María Chicano, Diego Carbonell, Julia Suárez-González, Sergio Lois, Mercedes Ballesteros-Culebras, Cristina Andrés-Zayas, Paula Muñiz, Gabriela Rodríguez-Macias, Mariana Bastos-Oreiro, Patricia Font and 6 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

María ChicanoDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Diego CarbonellDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.ORCID 0000-0003-2960-0301
Julia Suárez-GonzálezGregorio Marañón Health Research Institute (IiSGM), 28009 Madrid, Spain.
Sergio LoisSistemas Genómicos, 46980 Valencia, Spain.
Mercedes Ballesteros-CulebrasDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Cristina Andrés-ZayasGregorio Marañón Health Research Institute (IiSGM), 28009 Madrid, Spain.
Paula MuñizDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Gabriela Rodríguez-MaciasDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Mariana Bastos-OreiroDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Patricia FontDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Mónica BallesterosDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Mi KwonDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Javier AnguitaDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
José Luis Díez-MartínDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Ismael BuñoDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Carolina Martínez-LapercheDepartment of Hematology, Gregorio Marañón General University Hospital, 28009 Madrid, Spain.
Hospital General Universitario Gregorio Marañón · ESUniversidad Complutense de Madrid · ESSistemas Genómicos · ES

Funding

Fundación Mutua Madrileña FMM15-04Instituto de Salud Carlos III PI17/1880
6 · The paper itself

Abstract

Conventional cytogenetics are the gold standard for the identification of chromosomal alterations recurrent in myeloid neoplasms. Some next-generation sequencing (NGS) panels are designed for the detection of copy number variations (CNV) or translocations; however, their use is far from being widespread. Here we report on the results of a commercial panel including frequent mutations, CNVs and translocations in myeloid neoplasms. Frequent chromosomal alterations were analyzed by NGS in 135 patients with myeloid neoplasms and three with acute lymphoblastic leukemia. NGS analysis was performed using the enrichment-capture Myeloid Neoplasm-GeneSGKit (Sistemas Genómicos, Spain) gene panel including 35 genes for mutational analysis and frequent CNVs and translocations. NGS results were validated with cytogenetics and/or MLPA when possible. A total of 66 frequent alterations included in NGS panel were detected, 48 of them detected by NGS and cytogenetics. Ten of them were observed only by cytogenetics (mainly trisomy 8), and another eight only by NGS (mainly deletion of 12p). Aside from this, 38 secondary CNVs were detected in any of the genes included mainly for mutational analysis. NGS represents a reliable complementary source of information for the analysis of CNVs and translocations. Moreover, NGS could be a useful tool for the detection of alterations not observed by conventional cytogenetics.

Indexed as

cytogeneticsmyeloid neoplasmsNGS

Identifiers

PMID34203905
PMCPMC8232573
OpenAlexW3171575217

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.