Evidence map›Paper›PMID 34203389›Full record

ArticleJournal of personalized medicine2021

Targeted Sequencing of Taiwanese Breast Cancer with Risk Stratification by the Concurrent Genes Signature: A Feasibility Study.

Ching-Shui Huang, Chih-Yi Liu, Tzu-Pin Lu, Chi-Jung Huang, Jen-Hwey Chiu, Ling-Ming Tseng, Chi-Cheng Huang

Abstract read
In one paragraph

Article in Journal of personalized medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Prevalence ofFrontiers in oncology · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ching-Shui HuangDivision of General Surgery, Department of Surgery, Cathay General Hospital, Taipei 106, Taiwan.
Chih-Yi LiuDepartment of Pathology, Cathay General Hospital Sijhih, New Taipei 221, Taiwan.
Tzu-Pin LuInstitute of Epidemiology and Preventive Medicine, National Taiwan University, Taipei 110, Taiwan.
Chi-Jung HuangDepartment of Medical Research, Cathay General Hospital, Taipei 106, Taiwan.
Jen-Hwey ChiuInstitute of Traditional Medicine, School of Medicine, National Yang Ming Chiao Tung University, Taipei 11121, Taiwan.
Ling-Ming TsengSchool of Medicine, College of Medicine, National Yang Ming Chiao Tung University, Taipei 11221, Taiwan.
Chi-Cheng HuangComprehensive Breast Health Center, Department of Surgery, Taipei Veterans General Hospital, Taipei 1121, Taiwan.ORCID 0000-0003-4378-4776

Funding

Cathay Medical Center research grant CGH-MR-A10512Ministry of Science and Technology, Taiwan MOST-106-2314-B-030-014Ministry of Science and Technology, Taiwan MOST-107-2314-B-030-007-MY3
6 · The paper itself

Abstract

Breast cancer is the most common female malignancy in Taiwan, while conventional clinical and pathological factors fail to provide full explanation for prognostic heterogeneity. The aim of the study was to evaluate the feasibility of targeted sequencing combined with concurrent genes signature to identify somatic mutations with clinical significance. The extended concurrent genes signature was based on the coherent patterns between genomic and transcriptional alterations. Targeted sequencing of 61 Taiwanese breast cancers revealed 1036 variants, including 76 pathogenic and 545 likely pathogenic variants based on the ACMG classification. The most frequently mutated genes were

Indexed as

actionable mutationsbreast cancerconcurrent genesrisk stratificationTaiwantargeted sequencing

Identifiers

PMID34203389
PMCPMC8306786

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.