Evidence map›Paper›PMID 34202661›Full record

ReviewCells2021

Evolutionary Origins of DNA Repair Pathways: Role of Oxygen Catastrophe in the Emergence of DNA Glycosylases.

Paulina Prorok, Inga R Grin, Bakhyt T Matkarimov, Alexander A Ishchenko, Jacques Laval, Dmitry O Zharkov, Murat Saparbaev

Open access · goldAbstract readReview
In one paragraph

Review in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. UV photodamage pathways and the evolutionary selection of thymine over uracil in early genetic systems.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Paulina ProrokDepartment of Biology, Technical University of Darmstadt, 64287 Darmstadt, Germany.ORCID 0000-0002-1427-1528
Inga R GrinSB RAS Institute of Chemical Biology and Fundamental Medicine, 8 Lavrentieva Ave., 630090 Novosibirsk, Russia.
Bakhyt T MatkarimovNational Laboratory Astana, Nazarbayev University, Nur-Sultan 010000, Kazakhstan.
Alexander A IshchenkoGroupe «Mechanisms of DNA Repair and Carcinogenesis», Equipe Labellisée LIGUE 2016, CNRS UMR9019, Université Paris-Saclay, Gustave Roussy Cancer Campus, F-94805 Villejuif, France.ORCID 0000-0002-0488-8858
Jacques LavalGroupe «Mechanisms of DNA Repair and Carcinogenesis», Equipe Labellisée LIGUE 2016, CNRS UMR9019, Université Paris-Saclay, Gustave Roussy Cancer Campus, F-94805 Villejuif, France.
Dmitry O ZharkovSB RAS Institute of Chemical Biology and Fundamental Medicine, 8 Lavrentieva Ave., 630090 Novosibirsk, Russia.ORCID 0000-0001-5013-0194
Murat SaparbaevGroupe «Mechanisms of DNA Repair and Carcinogenesis», Equipe Labellisée LIGUE 2016, CNRS UMR9019, Université Paris-Saclay, Gustave Roussy Cancer Campus, F-94805 Villejuif, France.ORCID 0000-0002-4630-1074
Centre National de la Recherche Scientifique · FRNovosibirsk State University · RUNazarbayev University · KZTechnische Universität Darmstadt · DE

Funding

Agence Nationale de la Recherche ANR-18-CE44-0008Association pour la Recherche sur le Cancer PJA-20181208015Deutsche Forschungsgemeinschaft Project-ID 393547839 - SFB 1361, CA198/9-2, CA 198/12-1Électricité de France RB 2021-05Ligue Contre le Cancer Equipe Labellisee LIGUE 2016Ministry of Science and Higher Education of the Russian Federation АААА-А17-117020210023-1Nazarbayev University 091019CRP2111Russian Science Foundation 17-14-01190
6 · The paper itself

Abstract

It was proposed that the last universal common ancestor (LUCA) evolved under high temperatures in an oxygen-free environment, similar to those found in deep-sea vents and on volcanic slopes. Therefore, spontaneous DNA decay, such as base loss and cytosine deamination, was the major factor affecting LUCA's genome integrity. Cosmic radiation due to Earth's weak magnetic field and alkylating metabolic radicals added to these threats. Here, we propose that ancient forms of life had only two distinct repair mechanisms: versatile apurinic/apyrimidinic (AP) endonucleases to cope with both AP sites and deaminated residues, and enzymes catalyzing the direct reversal of UV and alkylation damage. The absence of uracil-DNA

Indexed as

DNA RepairEvolution, MolecularAlkylationAnimalsDNA DamageDNA GlycosylasesHumansOxygenDNA GlycosylasesOxygenAP endonucleasesDNA glycosylasesDNA repairprotein foldsstructural homology

Identifiers

PMID34202661
PMCPMC8307549
OpenAlexW3173242269

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.