Evidence map›Paper›PMID 34202351›Full record

ArticleJournal of clinical medicine2021

Whole-Exome Sequencing to Identify Potential Genetic Risk in Substance Use Disorders: A Pilot Feasibility Study.

P V AshaRani, Syidda Amron, Noor Azizah Bte Zainuldin, Sumanty Tohari, Alvin Y J Ng, Guo Song, Byrappa Venkatesh, Ajay S Mathuru

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

P V AshaRaniResearch Division, Institute of Mental Health, Singapore 539747, Singapore.ORCID 0000-0001-8215-5214
Syidda AmronNational Addictions Management Service, Institute of Mental Health, Singapore 539747, Singapore.
Noor Azizah Bte ZainuldinNational Addictions Management Service, Institute of Mental Health, Singapore 539747, Singapore.
Sumanty TohariInstitute of Molecular and Cell Biology, Singapore 138673, Singapore.
Alvin Y J NgInstitute of Molecular and Cell Biology, Singapore 138673, Singapore.
Guo SongNational Addictions Management Service, Institute of Mental Health, Singapore 539747, Singapore.
Byrappa VenkateshInstitute of Molecular and Cell Biology, Singapore 138673, Singapore.ORCID 0000-0003-3620-0277
Ajay S MathuruInstitute of Molecular and Cell Biology, Singapore 138673, Singapore.ORCID 0000-0003-4591-5274
Institute of Mental Health · SGInstitute of Molecular and Cell Biology · SGNational University of Singapore · SG

Funding

National Addictions Management Service Pilot study grant awarded to P.V.A, B.V and A.S.MYale-NUS College IG16-LR003 to A.S.MYale-NUS College IG19-BG106 to A.S.M
6 · The paper itself

Abstract

Genetics intersects with environmental, cultural, and social factors in the development of addictive disorders. This study reports the feasibility of whole-exome sequencing of trios (subject and two family members) to discover potential genetic variants in the development of substance use disorders (SUD). Family trios were recruited from the National Addictions Management Service in Singapore during the 2016-2018 period. Recruited subjects had severe alcohol use disorder (AUD) or opioid use disorder (OUD), with nicotine dependence (ND) and a family history of addictive disorders. Demographic characteristics and severity of addiction were captured. Whole-exome sequencing (WES) and analysis were performed on salivary samples collected from the trios. WES revealed variants in several genes in each individual and disruptive protein mutations in most. Variants were identified in genes previously associated with SUDs, such as Pleckstrin homology domain-containing family M member 3 (PLEKHM3), coiled-coil serine-rich protein 1 (CCSER1), LIM and calponin homology domains-containing protein 1 (LIMCH1), dynein axonemal heavy chain 8 (DNAH8), and the taste receptor type 2 member 38 (TAS2R38) involved in the perception of bitterness. The feasibility study suggests that subjects with a severe addiction profile, polysubstance use, and family history of addiction may often harbor gene variants that may predispose them to SUDs. This study could serve as a model for future precision medicine-based personalized interventional strategies for behavioral addictions and SUDs and for the discovery of potentially pathogenic genetic variants.

Indexed as

alcohol-dependencecohort pilot studyfamily triossubstance use disorderswhole-exome sequencing

Identifiers

PMID34202351
PMCPMC8269170
OpenAlexW3177345519

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.