Evidence map›Paper›PMID 34201311›Full record

ArticleGenes2021

Exploring Viral Diversity in a Gypsum Karst Lake Ecosystem Using Targeted Single-Cell Genomics.

Sigitas Šulčius, Gediminas Alzbutas, Viktorija Juknevičiūtė, Eugenijus Šimoliūnas, Petras Venckus, Monika Šimoliūnienė, Ričardas Paškauskas

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sigitas ŠulčiusLaboratory of Algology and Microbial Ecology, Nature Research Centre, Akademijos Str. 2, LT-08412 Vilnius, Lithuania.ORCID 0000-0002-2686-8348
Gediminas AlzbutasLaboratory of Algology and Microbial Ecology, Nature Research Centre, Akademijos Str. 2, LT-08412 Vilnius, Lithuania.
Viktorija JuknevičiūtėLaboratory of Algology and Microbial Ecology, Nature Research Centre, Akademijos Str. 2, LT-08412 Vilnius, Lithuania.
Eugenijus ŠimoliūnasDepartment of Molecular Microbiology and Biotechnology, Institute of Biochemistry, Life Sciences Centre, Vilnius University, Saulėtekio Av. 7, LT-10257 Vilnius, Lithuania.ORCID 0000-0001-5712-3587
Petras VenckusLaboratory of Algology and Microbial Ecology, Nature Research Centre, Akademijos Str. 2, LT-08412 Vilnius, Lithuania.
Monika ŠimoliūnienėDepartment of Molecular Microbiology and Biotechnology, Institute of Biochemistry, Life Sciences Centre, Vilnius University, Saulėtekio Av. 7, LT-10257 Vilnius, Lithuania.ORCID 0000-0002-3225-2873
Ričardas PaškauskasLaboratory of Algology and Microbial Ecology, Nature Research Centre, Akademijos Str. 2, LT-08412 Vilnius, Lithuania.
Nature Research Centre · LTVilnius University · LT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Little is known about the diversity and distribution of viruses infecting green sulfur bacteria (GSB) thriving in euxinic (sulfuric and anoxic) habitats, including gypsum karst lake ecosystems. In this study, we used targeted cell sorting combined with single-cell sequencing to gain insights into the gene content and genomic potential of viruses infecting sulfur-oxidizing bacteria

Indexed as

ViromeBacterial ProteinsBacteriophagesCalcium SulfateChlorobiumGenomicsHost-Pathogen InteractionsLakesMetagenomeSingle-Cell AnalysisSulfurBacterial ProteinsCalcium SulfateSulfurchlorobium phagesgreen sulfur bacteriagypsum karst ecosystemKirkilaiLithuaniaMicroviridaeNatura 2000rare ecosystemsSingle Cell Genomicsvirus diversity

Identifiers

PMID34201311
PMCPMC8226683
OpenAlexW3172107383

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.