Evidence map›Paper›PMID 34199411›Full record

ArticleMolecules (Basel, Switzerland)2021

A Multi-Omics Study of Human Testis and Epididymis.

Weimin Zheng, Yang Zhang, Chuanyu Sun, Shengyang Ge, Yifan Tan, Huali Shen, Pengyuan Yang

Open access · goldAbstract readComparative Study
In one paragraph

Article in Molecules (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Weimin ZhengDepartment of Chemistry, Fudan University, Shanghai 200433, China.
Yang ZhangDepartment of Systems Biology for Medicine and Institutes of Biomedical Sciences, Shanghai Medical College, Fudan University, Shanghai 200032, China.
Chuanyu SunDepartment of Urology, Huashan Hospital, Fudan University, Shanghai 200040, China.
Shengyang GeDepartment of Urology, Huashan Hospital, Fudan University, Shanghai 200040, China.
Yifan TanDepartment of Urology, Huashan Hospital, Fudan University, Shanghai 200040, China.
Huali ShenDepartment of Systems Biology for Medicine and Institutes of Biomedical Sciences, Shanghai Medical College, Fudan University, Shanghai 200032, China.
Pengyuan YangDepartment of Chemistry, Fudan University, Shanghai 200433, China.
Fudan University · CNShanghai Medical College of Fudan University · CNHuashan Hospital · CN

Funding

National Key Research and Development Program of China 2018YFC0910700, 2016YFB0201702
6 · The paper itself

Abstract

The human testis and epididymis play critical roles in male fertility, including the spermatogenesis process, sperm storage, and maturation. However, the unique functions of the two organs had not been systematically studied. Herein, we provide a systematic and comprehensive multi-omics study between testis and epididymis. RNA-Seq profiling detected and quantified 19,653 in the testis and 18,407 in the epididymis. Proteomic profiling resulted in the identification of a total of 11,024 and 10,386 proteins in the testis and epididymis, respectively, including 110 proteins that previously have been classified as MPs (missing proteins). Furthermore, Five MPs expressed in testis were validated by the MRM method. Subsequently, multi-omcis between testis and epididymis were performed, including biological functions and pathways of DEGs (Differentially Expressed Genes) in each group, revealing that those differences were related to spermatogenesis, male gamete generation, as well as reproduction. In conclusion, this study can help us find the expression regularity of missing protein and help related scientists understand the physiological functions of testis and epididymis more deeply.

Indexed as

Protein Interaction MapsChromatography, LiquidEpididymisGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHigh-Throughput Nucleotide SequencingHumansMaleMutationOrgan SpecificityProteomicsSequence Analysis, RNASpermatogenesisTandem Mass SpectrometryTestisbeta-defensinmissing proteinMRM techniqueproteomicstranscriptome

Identifiers

PMID34199411
PMCPMC8199593
OpenAlexW3169233413

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.