Evidence map›Paper›PMID 34198322›Full record

ArticleThe Biochemical journal2021

Identifying SARS-CoV-2 antiviral compounds by screening for small molecule inhibitors of nsp13 helicase.

Jingkun Zeng, Florian Weissmann, Agustina P Bertolin, Viktor Posse, Berta Canal, Rachel Ulferts, Mary Wu, Ruth Harvey, Saira Hussain, Jennifer C Milligan and 9 more

Open access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
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  8. Journal of enzyme inhibition and medicinal chemistry · 2025
    Article
  9. Review
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  12. Article
  13. Article
  14. Article
  15. Interference of small compounds and MgScientific reports · 2024
    Article
  16. Article
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  18. COVID-19 drug discovery and treatment options.Nature reviews. Microbiology · 2024
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 1 country.

Jingkun Zeng *Chromosome Replication Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Florian Weissmann *Chromosome Replication Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Agustina P Bertolin *Chromosome Replication Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Viktor PosseChromosome Replication Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Berta CanalChromosome Replication Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Rachel UlfertsCell Biology of Infection Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Mary WuHigh Throughput Screening, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Ruth HarveyWorld Influenza Centre, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Saira HussainWorld Influenza Centre, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Jennifer C MilliganChromosome Replication Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Chloe RoustanStructural Biology, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Annabel BorgStructural Biology, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Laura McCoyDivision of Infection and Immunity, University College London, London WC1E 6BT, U.K.
Lucy S DruryChromosome Replication Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Svend KjaerStructural Biology, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
John McCauleyWorld Influenza Centre, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Michael HowellHigh Throughput Screening, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
Rupert BealeCell Biology of Infection Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.
John F X DiffleyChromosome Replication Laboratory, The Francis Crick Institute, 1 Midland Road, London NW1 1AT, U.K.ORCID 0000-0001-5184-7680
The Francis Crick Institute · GBUniversity College London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The coronavirus disease 2019 (COVID-19) pandemic, which is caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is a global public health challenge. While the efficacy of vaccines against emerging and future virus variants remains unclear, there is a need for therapeutics. Repurposing existing drugs represents a promising and potentially rapid opportunity to find novel antivirals against SARS-CoV-2. The virus encodes at least nine enzymatic activities that are potential drug targets. Here, we have expressed, purified and developed enzymatic assays for SARS-CoV-2 nsp13 helicase, a viral replication protein that is essential for the coronavirus life cycle. We screened a custom chemical library of over 5000 previously characterized pharmaceuticals for nsp13 inhibitors using a fluorescence resonance energy transfer-based high-throughput screening approach. From this, we have identified FPA-124 and several suramin-related compounds as novel inhibitors of nsp13 helicase activity in vitro. We describe the efficacy of these drugs using assays we developed to monitor SARS-CoV-2 growth in Vero E6 cells.

Indexed as

Drug Evaluation, PreclinicalAnimalsAntiviral AgentsChlorocebus aethiopsEnzyme AssaysFluorescence Resonance Energy TransferHigh-Throughput Screening AssaysReproducibility of ResultsRNA HelicasesSARS-CoV-2Small Molecule LibrariesSuraminVero CellsViral Nonstructural ProteinsAntiviral AgentsRNA HelicasesSmall Molecule LibrariesSuraminViral Nonstructural ProteinscoronavirusCOVID-19nsp13RNA helicase

Identifiers

PMID34198322
PMCPMC8286831
OpenAlexW3176450343

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.