Evidence map›Paper›PMID 34198314›Full record

ArticleThe Analyst2021

Multi-modal image sharpening in fourier transform infrared (FTIR) microscopy.

Rupali Mankar, Chalapathi Charan Gajjela, Farideh Foroozandeh Shahraki, Saurabh Prasad, David Mayerich, Rohith Reddy

Abstract read
In one paragraph

Article in The Analyst, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rupali MankarUniversity of Houston, Houston, Texas, USA. rkreddy@uh.edu.ORCID http://orcid.org/0000-0001-5111-2406
Chalapathi Charan GajjelaUniversity of Houston, Houston, Texas, USA. rkreddy@uh.edu.
Farideh Foroozandeh ShahrakiUniversity of Houston, Houston, Texas, USA. rkreddy@uh.edu.
Saurabh PrasadUniversity of Houston, Houston, Texas, USA. rkreddy@uh.edu.
David MayerichUniversity of Houston, Houston, Texas, USA. rkreddy@uh.edu.ORCID http://orcid.org/0000-0002-3949-6133
Rohith ReddyUniversity of Houston, Houston, Texas, USA. rkreddy@uh.edu.ORCID http://orcid.org/0000-0002-4403-5614

Funding

TRAINING PROGRAM IN COMPUTATIONAL BIOLOGY AND MEDICINET15LM007093 · NLM · RICE UNIVERSITY · PI Lydia E. Kavraki · 1992 to 2026
$20.8M
Structural and Molecular Phenotyping of Embryonic Development through Multi-Modal Optical ImagingR01HL146745 · NHLBI · UNIVERSITY OF HOUSTON · PI MAYERICH, DAVID · 2019 to 2023
$3.7M
NHLBI NIH HHS R01 HL146745NLM NIH HHS T15 LM007093
6 · The paper itself

Abstract

Mid-infrared Spectroscopic Imaging (MIRSI) provides spatially-resolved molecular specificity by measuring wavelength-dependent mid-infrared absorbance. Infrared microscopes use large numerical aperture objectives to obtain high-resolution images of heterogeneous samples. However, the optical resolution is fundamentally diffraction-limited, and therefore wavelength-dependent. This significantly limits resolution in infrared microscopy, which relies on long wavelengths (2.5 μm to 12.5 μm) for molecular specificity. The resolution is particularly restrictive in biomedical and materials applications, where molecular information is encoded in the fingerprint region (6 μm to 12 μm), limiting the maximum resolving power to between 3 μm and 6 μm. We present an unsupervised curvelet-based image fusion method that overcomes limitations in spatial resolution by augmenting infrared images with label-free visible microscopy. We demonstrate the effectiveness of this approach by fusing images of breast and ovarian tumor biopsies acquired using both infrared and dark-field microscopy. The proposed fusion algorithm generates a hyperspectral dataset that has both high spatial resolution and good molecular contrast. We validate this technique using multiple standard approaches and through comparisons to super-resolved experimentally measured photothermal spectroscopic images. We also propose a novel comparison method based on tissue classification accuracy.

Indexed as

AlgorithmsMicroscopyFourier AnalysisSpectrophotometry, InfraredSpectroscopy, Fourier Transform Infrared

Identifiers

PMID34198314
PMCPMC8903170

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.