Evidence map›Paper›PMID 34197832›Full record

ArticleGastroenterology2021

Immunogenomics of Colorectal Cancer Response to Checkpoint Blockade: Analysis of the KEYNOTE 177 Trial and Validation Cohorts.

Michele Bortolomeazzi, Mohamed Reda Keddar, Lucia Montorsi, Amelia Acha-Sagredo, Lorena Benedetti, Damjan Temelkovski, Subin Choi, Nedyalko Petrov, Katrina Todd, Patty Wai and 19 more

Open access · hybridAbstract readValidation Study
In one paragraph

Article in Gastroenterology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed, 1 pooled it
8.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 1 synthesis or guideline pooled it, 133 citations in OpenAlex.

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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 8 institutions in 2 countries.

Michele BortolomeazziCancer Systems Biology Laboratory, The Francis Crick Institute, London, United Kingdom; School of Cancer and Pharmaceutical Sciences, King's College London, London, United Kingdom.
Mohamed Reda KeddarCancer Systems Biology Laboratory, The Francis Crick Institute, London, United Kingdom; School of Cancer and Pharmaceutical Sciences, King's College London, London, United Kingdom.
Lucia MontorsiCancer Systems Biology Laboratory, The Francis Crick Institute, London, United Kingdom; School of Cancer and Pharmaceutical Sciences, King's College London, London, United Kingdom.
Amelia Acha-SagredoCancer Systems Biology Laboratory, The Francis Crick Institute, London, United Kingdom; School of Cancer and Pharmaceutical Sciences, King's College London, London, United Kingdom.
Lorena BenedettiCancer Systems Biology Laboratory, The Francis Crick Institute, London, United Kingdom; School of Cancer and Pharmaceutical Sciences, King's College London, London, United Kingdom.
Damjan TemelkovskiCancer Systems Biology Laboratory, The Francis Crick Institute, London, United Kingdom; School of Cancer and Pharmaceutical Sciences, King's College London, London, United Kingdom.
Subin ChoiCancer Systems Biology Laboratory, The Francis Crick Institute, London, United Kingdom; School of Cancer and Pharmaceutical Sciences, King's College London, London, United Kingdom.
Nedyalko PetrovBiomedical Research Centre, Guy's and St. Thomas' National Health Service Trust, London, United Kingdom.
Katrina ToddBiomedical Research Centre, Guy's and St. Thomas' National Health Service Trust, London, United Kingdom.
Patty WaiState-Dependent Neural Processing Laboratory, The Francis Crick Institute, London, United Kingdom.
Johannes KohlState-Dependent Neural Processing Laboratory, The Francis Crick Institute, London, United Kingdom.
Tamara DennerExperimental Histopathology, The Francis Crick Institute, London, United Kingdom.
Emma NyeExperimental Histopathology, The Francis Crick Institute, London, United Kingdom.
Robert GoldstoneAdvanced Sequencing Facility, The Francis Crick Institute, London, United Kingdom.
Sophia WardAdvanced Sequencing Facility, The Francis Crick Institute, London, United Kingdom.
Gareth A WilsonCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom; Cancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom.
Maise Al BakirCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom; Cancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom.
Charles SwantonCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom; Cancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom.
Susan JohnSchool of Immunology and Microbial Sciences, King's College London, London, United Kingdom.
James MilesFASTBASE Solutions S.L, Derio, Spain.
Banafshe LarijaniFASTBASE Solutions S.L, Derio, Spain; Cell Biophysics Laboratory, Ikerbasque, Basque Foundation for Science, Research Centre for Experimental Marine Biology and Biotechnology & Biophysics Institute, University of the Basque Country, Leioa, Bizkaia, Spain; Centre for Therapeutic Innovation, Cell Biophysics Laboratory, Department of Pharmacy and Pharmacology & Department of Physics, University of Bath, Bath, United Kingdom.
Victoria KuneneMedical Oncology, University Hospitals Birmingham National Health Service Foundation Trust, Birmingham, United Kingdom.
Elisa FontanaDrug Development Unit, Sarah Cannon Research Institute UK, London, United Kingdom.
Hendrik-Tobias ArkenauDrug Development Unit, Sarah Cannon Research Institute UK, London, United Kingdom; Department of Oncology, University College Hospital, London, United Kingdom.
Peter J ParkerSchool of Cancer and Pharmaceutical Sciences, King's College London, London, United Kingdom; Protein Phosphorylation Laboratory, The Francis Crick Institute, London, United Kingdom.
Manuel Rodriguez-JustoDepartment of Histopathology, University College London Cancer Institute, London, United Kingdom.
Kai-Keen ShiuDepartment of Gastrointestinal Oncology, University College London Hospital National Health Service Foundation Trust, London, United Kingdom.
Jo SpencerSchool of Immunology and Microbial Sciences, King's College London, London, United Kingdom. Electronic address: jo.spencer@kcl.ac.uk.
Francesca D CiccarelliCancer Systems Biology Laboratory, The Francis Crick Institute, London, United Kingdom; School of Cancer and Pharmaceutical Sciences, King's College London, London, United Kingdom. Electronic address: francesca.ciccarelli@crick.ac.uk.
King's College London · GBThe Francis Crick Institute · GBNational Health Service · GBFastbase Solutions (Spain) · ESIkerbasque · ESLondon Cancer · GBSarah Cannon Research Institute · GBUniversity College Hospital · GB

Funding

Cancer Research UK 17786Cancer Research UK 20466Cancer Research UK 25253Cancer Research UK 30025Cancer Research UK C43634/A25487Cancer Research UK C604/A25135Cancer Research UK C7893/A26233Wellcome Trust FC001002Wellcome Trust FC001130Wellcome Trust FC001169Wellcome Trust FC001745
6 · The paper itself

Abstract

BACKGROUND &

aimsColorectal cancer (CRC) shows variable response to immune checkpoint blockade, which can only partially be explained by high tumor mutational burden (TMB). We conducted an integrated study of the cancer tissue and associated tumor microenvironment (TME) from patients treated with pembrolizumab (KEYNOTE 177 clinical trial) or nivolumab to dissect the cellular and molecular determinants of response to anti- programmed cell death 1 (PD1) immunotherapy.

methodsWe selected multiple regions per tumor showing variable T-cell infiltration for a total of 738 regions from 29 patients, divided into discovery and validation cohorts. We performed multiregional whole-exome and RNA sequencing of the tumor cells and integrated these with T-cell receptor sequencing, high-dimensional imaging mass cytometry, detection of programmed death-ligand 1 (PDL1) interaction in situ, multiplexed immunofluorescence, and computational spatial analysis of the TME.

resultsIn hypermutated CRCs, response to anti-PD1 immunotherapy was not associated with TMB but with high clonality of immunogenic mutations, clonally expanded T cells, low activation of Wnt signaling, deregulation of the interferon gamma pathway, and active immune escape mechanisms. Responsive hypermutated CRCs were also rich in cytotoxic and proliferating PD1

conclusionsOur study clarified the limits of TMB as a predictor of response of CRC to anti-PD1 immunotherapy. It identified a population of antigen-presenting macrophages interacting with CD8 T cells that consistently segregate with response. We therefore concluded that anti-PD1 agents release the PD1-PDL1 interaction between CD8 T cells and macrophages to promote cytotoxic antitumor activity.

Indexed as

Immunogenetic PhenomenaImmunogeneticsTumor MicroenvironmentAntibodies, Monoclonal, HumanizedBiomarkers, TumorCD8-Positive T-LymphocytesClinical Trials as TopicColorectal NeoplasmsCytotoxicity, ImmunologicExome SequencingGene Expression ProfilingHumansImmune Checkpoint InhibitorsLymphocytes, Tumor-InfiltratingMutationNivolumabAntibodies, Monoclonal, HumanizedBiomarkers, TumorImmune Checkpoint InhibitorsNivolumabPDCD1 protein, humanpembrolizumabProgrammed Cell Death 1 ReceptorAnti-PD1 ImmunotherapyCD8 T cellsInterferon GammaTumor Mutational BurdenWnt Signaling

Identifiers

PMID34197832
PMCPMC8527923
OpenAlexW3174672654

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.