Evidence map›Paper›PMID 34197732›Full record

ArticleNeuron2021

Maximally selective single-cell target for circuit control in epilepsy models.

Darian Hadjiabadi, Matthew Lovett-Barron, Ivan Georgiev Raikov, Fraser T Sparks, Zhenrui Liao, Scott C Baraban, Jure Leskovec, Attila Losonczy, Karl Deisseroth, Ivan Soltesz

Open access · bronzeAbstract read
In one paragraph

Article in Neuron, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
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  15. Seizure Event Detection Using Intravital Two-Photon Calcium Imaging Data.bioRxiv : the preprint server for biology · 2023
    Article
  16. Article
  17. Article
  18. Review
  19. Microscale Neuronal Activity Collectively Drives Chaotic and Inflexible Dynamics at the Macroscale in Seizures.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Darian HadjiabadiDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA; Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA. Electronic address: dhh@stanford.edu.
Matthew Lovett-BarronDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA; Neurobiology Section, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA.
Ivan Georgiev RaikovDepartment of Neurosurgery, Stanford University, Stanford, CA 94305, USA.
Fraser T SparksDepartment of Neuroscience, Columbia University, New York, NY 10027, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA; The Kavli Institute for Brain Science, Columbia University, New York, NY 10027, USA.
Zhenrui LiaoDepartment of Neuroscience, Columbia University, New York, NY 10027, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA; The Kavli Institute for Brain Science, Columbia University, New York, NY 10027, USA.
Scott C BarabanDepartment of Neurological Surgery and Weill Institute for Neuroscience, University of California, San Francisco, San Francisco, CA 94143, USA.
Jure LeskovecDepartment of Computer Science, Stanford University, Stanford, CA 94305, USA; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA.
Attila LosonczyDepartment of Neuroscience, Columbia University, New York, NY 10027, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA; The Kavli Institute for Brain Science, Columbia University, New York, NY 10027, USA.
Karl DeisserothDepartment of Bioengineering, Stanford University, Stanford, CA 94305, USA; Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA.
Ivan SolteszDepartment of Neurosurgery, Stanford University, Stanford, CA 94305, USA.
Stanford University · USColumbia University · USHoward Hughes Medical Institute · USNeurological Surgery · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007367 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI REINER, STEVEN L · 1985 to 2021
$25.1M
Towards a Complete Description of the Circuitry Underlying Sharp Wave-Mediated Memory ReplayU19NS104590 · NINDS · STANFORD UNIVERSITY · PI BUZSAKI, GYORGY, LISMAN, JOHN E · 2017 to 2021
$13.2M
ZEBRAFISH MODELS FOR DRAVET SYNDROME RESEARCH AND DISCOVERYR01NS096976 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BARABAN, SCOTT C · 2016 to 2024
$3.9M
Closed-loop intervention in epilepsy.R01NS094668 · NINDS · STANFORD UNIVERSITY · PI LOSONCZY, ATTILA, SOLTESZ, IVAN · 2015 to 2019
$2.3M
Functional evaluation of catastrophic childhood epilepsy genes in zebrafishR01NS103139 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BARABAN, SCOTT C · 2017 to 2020
$1.4M
Discovery and characterization of brain-wide neuromodulatory circuits regulating arousalR00MH112840 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LOVETT-BARRON, MATTHEW · 2020 to 2022
$746k
Discovery and characterization of brain-wide neuromodulatory circuits regulating arousalK99MH112840 · NIMH · STANFORD UNIVERSITY · PI LOVETT-BARRON, MATTHEW · 2017 to 2018
$242k
Dissecting microcircuit alterations in the epileptic dentate gyrus with functional imagingF31NS120783 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LIAO, ZHENRUI · 2020 to 2022
$119k
Howard Hughes Medical InstituteNIGMS NIH HHS T32 GM007367NIMH NIH HHS K99 MH112840NIMH NIH HHS R00 MH112840NINDS NIH HHS F31 NS120783NINDS NIH HHS R01 NS094668NINDS NIH HHS R01 NS096976NINDS NIH HHS R01 NS103139NINDS NIH HHS U19 NS104590
6 · The paper itself

Abstract

Neurological and psychiatric disorders are associated with pathological neural dynamics. The fundamental connectivity patterns of cell-cell communication networks that enable pathological dynamics to emerge remain unknown. Here, we studied epileptic circuits using a newly developed computational pipeline that leveraged single-cell calcium imaging of larval zebrafish and chronically epileptic mice, biologically constrained effective connectivity modeling, and higher-order motif-focused network analysis. We uncovered a novel functional cell type that preferentially emerged in the preseizure state, the superhub, that was unusually richly connected to the rest of the network through feedforward motifs, critically enhancing downstream excitation. Perturbation simulations indicated that disconnecting superhubs was significantly more effective in stabilizing epileptic circuits than disconnecting hub cells that were defined traditionally by connection count. In the dentate gyrus of chronically epileptic mice, superhubs were predominately modeled adult-born granule cells. Collectively, these results predict a new maximally selective and minimally invasive cellular target for seizure control.

Indexed as

AnimalsCell CommunicationDentate GyrusEpilepsyNerve NetNeuronsSeizuresZebrafishadult-born granule cellscalcium imagingeffective connectivity modelingepilepsyhigher-order organizationhubsmotifsnetwork scienceseizure controlsingle-cells

Identifiers

PMID34197732
PMCPMC8448204
OpenAlexW3173318021

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.