Evidence map›Paper›PMID 34196898›Full record

ArticleMolecular biology reports2021

Genetic and expression deregulation of immunoregulatory genes in rheumatoid arthritis.

Muhammad Zhaid Hussain, Ishrat Mahjabeen, Muhammad Shahid Khan, Naila Mumtaz, Syed Uzair Maqsood, Farooq Ikram, Syed Nazir Ahmed, Qurrat-Ul-Ain Kalim, Rabia Abbas, Ahmed Ammar Cheema

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Article in Molecular biology reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Muhammad Zhaid HussainDepartment of Rheumatology, National University of Medical Sciences, Rawalpindi, Pakistan. zahidrajpoot@icloud.com.
Ishrat MahjabeenCancer Genetics and Epigenetics Lab, Department of Biosciences, COMSATS University, Islamabad, Pakistan.
Muhammad Shahid KhanHITEC-Institute of Medical Sciences, Rawalpindi, Pakistan.
Naila MumtazDepartment of Rheumatology, National University of Medical Sciences, Rawalpindi, Pakistan.
Syed Uzair MaqsoodDepartment of Rheumatology, National University of Medical Sciences, Rawalpindi, Pakistan.
Farooq IkramDepartment of Rheumatology, National University of Medical Sciences, Rawalpindi, Pakistan.
Syed Nazir AhmedDepartment of Rheumatology, Fauji Foundation Hospital, Rawalpindi, Pakistan.
Qurrat-Ul-Ain KalimDepartment of Rheumatology, National University of Medical Sciences, Rawalpindi, Pakistan.
Rabia AbbasDepartment of Rheumatology, National University of Medical Sciences, Rawalpindi, Pakistan.
Ahmed Ammar CheemaDepartment of Medicine, Sheikh Zayed Medical College, and Hospital, Rahim Yar Khan, Pakistan.
National University of Medical Sciences · PKCOMSATS University Islamabad · PKFoundation University Medical College · PKShaikh Zayed Medical College and Hospital · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rheumatoid arthritis (RA) is one of the most common autoimmune diseases globally, and is an important public health concern, associating with early death and systemic complications. Although key development in RA treatment has already been made still RA affected individuals face comorbidity and disability. Therefore, there is a need to discover new risk factors in helping early diagnosis and treatment of RA. The present study is designed to assess the variations of Vitamin D receptor (VDR) and interleukin -6 (IL-6) in RA patients. Polymorphisms of said genes were calculated in 300 RA patients and 300 controls, using Tetra-ARMS polymerase chain reaction. Secondly, expression levels of selected genes were checked using the quantitative PCR (qPCR) and obtained results were evaluated using a different statistical test. Logistic regression analysis showed that frequency of mutant allele of VDR gene polymorphisms (rs11168268, OR = 4.84; 95% CI = 2.94-7.97; p = 0.0001; rs2248098, OR = 1.65; 95% CI = 1.07-2.54; p = 0.02) and IL-6 gene polymorphisms (rs184229712, OR = 2.47; 95% CI = 1.56-3.92, p = 0.0001; rs36215814, OR = 2.14; 95% CI = 1.30-3.53; p = 0.002) was observed significantly higher in RA patients vs controls. Expression analysis showed the significant upregulation of IL-6 (p < 0.0001) and downregulation of VDR gene (p < 0.0001) in RA cases vs controls. ROC curve analysis showed that downregulation of IL-6 (AUC = 0.86, p < 0.001) and upregulation of VDR (AUC = 0.77, p < 0.001) was act as the good diagnostic marker for detection/diagnosis of arthritis. In conclusions, data from the present study showed the significant involvement of VDR and IL-6 gene variations in RA pathogenesis.

Indexed as

AdultAgedAllelesArthritis, RheumatoidCase-Control StudiesFemaleGene ExpressionGene Expression RegulationGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansInterleukin-6MaleMiddle AgedPakistanIL6 protein, humanInterleukin-6Receptors, CalcitriolVDR protein, humanDiagnosis of rheumatoid arthritisIL-6Linkage disequilibriumRheumatoid arthritisVDR

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PMID34196898
OpenAlexW3176144526

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.