Evidence map›Paper›PMID 34196568›Full record

ArticleThe journal of physical chemistry letters2021

Interfacial Water Many-Body Effects Drive Structural Dynamics and Allosteric Interactions in SARS-CoV-2 Main Protease Dimerization Interface.

Dina El Ahdab, Louis Lagardère, Théo Jaffrelot Inizan, Fréderic Célerse, Chengwen Liu, Olivier Adjoua, Luc-Henri Jolly, Nohad Gresh, Zeina Hobaika, Pengyu Ren and 2 more

Abstract read
In one paragraph

Article in The journal of physical chemistry letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. In Silico Design of New Dual Inhibitors of SARS-CoV-2 MInternational journal of molecular sciences · 2023
    Article
  6. Computational and structural biotechnology journal · 2023
    Article
  7. Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Dina El AhdabSorbonne Université, LCT, UMR 7616 CNRS, 75005 Paris, France.
Louis LagardèreSorbonne Université, LCT, UMR 7616 CNRS, 75005 Paris, France.
Théo Jaffrelot InizanSorbonne Université, LCT, UMR 7616 CNRS, 75005 Paris, France.
Fréderic CélerseSorbonne Université, LCT, UMR 7616 CNRS, 75005 Paris, France.ORCID https://orcid.org/0000-0001-8584-6547
Chengwen LiuDepartment of Biomedical Engineering, University of Texas at Austin, Austin, Texas 78712, United States.ORCID https://orcid.org/0000-0002-3930-7793
Olivier AdjouaSorbonne Université, LCT, UMR 7616 CNRS, 75005 Paris, France.
Luc-Henri JollySorbonne Université, IP2CT, FR 2622 CNRS, 75005 Paris, France.
Nohad GreshSorbonne Université, LCT, UMR 7616 CNRS, 75005 Paris, France.ORCID https://orcid.org/0000-0001-7174-2907
Zeina HobaikaUniversité Saint-Joseph de Beyrouth, UR EGP, Centre d'Analyses et de Recherche, Faculté des Sciences, 1104 2020 Beirut, Lebanon.
Pengyu RenDepartment of Biomedical Engineering, University of Texas at Austin, Austin, Texas 78712, United States.ORCID https://orcid.org/0000-0002-5613-1910
Richard G MarounUniversité Saint-Joseph de Beyrouth, UR EGP, Centre d'Analyses et de Recherche, Faculté des Sciences, 1104 2020 Beirut, Lebanon.
Jean-Philip PiquemalSorbonne Université, LCT, UMR 7616 CNRS, 75005 Paris, France.ORCID https://orcid.org/0000-0001-6615-9426

Funding

DEVELOPMENT OF A NEXT-GENERATION NUCLEIC ACID FORCE FIELDR01GM106137 · NIGMS · WASHINGTON UNIVERSITY · PI JAY PONDER, Pengyu Ren · 2013 to 2026
$3.5M
Specificity and Selectivity in Protein-Ion BindingR01GM114237 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI PONDER, JAY, REN, PENGYU · 2015 to 2023
$2.6M
NIGMS NIH HHS R01 GM106137NIGMS NIH HHS R01 GM114237
6 · The paper itself

Abstract

Following our previous work (

Indexed as

Molecular Dynamics SimulationAllosteric SiteCatalytic DomainCoronavirus M ProteinsCOVID-19DimerizationHumansHydrogen BondingHydrogen-Ion ConcentrationSARS-CoV-2Viral Matrix ProteinsWaterCoronavirus M Proteinsmembrane protein, SARS-CoV-2Viral Matrix ProteinsWater

Identifiers

PMID34196568
PMCPMC8262171

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.