Evidence map›Paper›PMID 34195680›Full record

ArticleCell reports. Medicine2021

A diverse collection of B cells responded to HIV infection in infant BG505.

Cassandra Simonich, Mackenzie M Shipley, Laura Doepker, Theodore Gobillot, Meghan Garrett, Evan M Cale, Brianna Hennessy, Hannah Itell, Vrasha Chohan, Nicole Doria-Rose and 2 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports. Medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Cassandra SimonichHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Mackenzie M ShipleyHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Laura DoepkerHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Theodore GobillotHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Meghan GarrettHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Evan M CaleVaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
Brianna HennessyHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Hannah ItellHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Vrasha ChohanHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Nicole Doria-RoseVaccine Research Center, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.
Ruth NduatiDepartment of Pediatrics and Child Health, University of Nairobi, Nairobi, Kenya.
Julie OverbaughHuman Biology Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Fred Hutch Cancer Center · USUniversity of Washington · USNational Institutes of Health · USUniversity of Nairobi · KE

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
VENEREAL DISEASET32AI007140 · NIAID · UNIVERSITY OF WASHINGTON · PI Julia Cook Dombrowski · 1985 to 2026
$19.4M
Isolation of Monoclonal Antiobodies Against HIVZIAAI005095 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI DORIA-ROSE, NICOLE · 2009 to 2025
$14.5M
Defining the Prevalence and Viral Genetics of Zika Virus in KenyaF30AI142870 · NIAID · UNIVERSITY OF WASHINGTON · PI GOBILLOT, THEODORE AUGUST · 2019 to 2021
$131k
Characterizing broadly neutralizing antibody responses of HIV-1-infected infantsF30AI122866 · NIAID · UNIVERSITY OF WASHINGTON · PI SIMONICH, CASSANDRA ARIEN LYNN · 2016 to 2018
$125k
NIAID NIH HHS F30 AI122866NIAID NIH HHS F30 AI142870NIAID NIH HHS T32 AI007140NIGMS NIH HHS T32 GM007270
6 · The paper itself

Abstract

Increasing evidence suggests infants develop unique neutralizing antibody (nAb) responses to HIV compared to adults. Here, we dissected the nAb response of an infant whose virus is in clinical trials as a vaccine immunogen, with a goal of characterizing the broad responses in the infant to this antigen. We isolated 73 nAbs from infant BG505 and identified a large number of clonal families. Twenty-six antibodies neutralized tier 2 viruses-in some cases, viruses from the same clade as BG505, and in others, a different clade, although none showed notable breadth. Several nAbs demonstrated antibody-dependent cellular cytotoxicity activity and targeted the V3 loop. These findings suggest an impressive polyclonal response to HIV infection in infant BG505, adding to the growing evidence that the nAb response to HIV in infants is polyclonal-a desirable vaccine response to a rapidly evolving virus like HIV.

Indexed as

AdultAmino Acid SequenceAntibodies, NeutralizingAntibody-Dependent Cell CytotoxicityB-LymphocytesChild, PreschoolClone CellsEpitopesHIV-1HIV AntibodiesHIV InfectionsHumansImmunoglobulin GMaleAntibodies, NeutralizingEpitopesHIV AntibodiesImmunoglobulin GADCCBG505HIVinfantneutralizing antibodypolyclonalV3

Identifiers

PMID34195680
PMCPMC8233660
OpenAlexW3169529194

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.