Evidence map›Paper›PMID 34193965›Full record

ArticleThe ISME journal2021

First come, first served: superinfection exclusion in Deformed wing virus is dependent upon sequence identity and not the order of virus acquisition.

Olesya N Gusachenko, Luke Woodford, Katharin Balbirnie-Cumming, David J Evans

Open access · hybridAbstract read
In one paragraph

Article in The ISME journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.4field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Olesya N GusachenkoBiomedical Sciences Research Complex, University of St. Andrews, North Haugh, St. Andrews, UK. olesya.gusachenko@gmail.com.ORCID http://orcid.org/0000-0002-9324-9723
Luke WoodfordBiomedical Sciences Research Complex, University of St. Andrews, North Haugh, St. Andrews, UK.ORCID http://orcid.org/0000-0003-2530-2120
Katharin Balbirnie-CummingBiomedical Sciences Research Complex, University of St. Andrews, North Haugh, St. Andrews, UK.
David J EvansBiomedical Sciences Research Complex, University of St. Andrews, North Haugh, St. Andrews, UK.ORCID http://orcid.org/0000-0002-1315-4258
University of St Andrews · GB

Funding

Biotechnology and Biological Sciences Research Council BB/I000828/1Biotechnology and Biological Sciences Research Council BB/M00337X/2
6 · The paper itself

Abstract

Deformed wing virus (DWV) is the most important globally distributed pathogen of honey bees and, when vectored by the ectoparasite Varroa destructor, is associated with high levels of colony losses. Divergent DWV types may differ in their pathogenicity and are reported to exhibit superinfection exclusion upon sequential infections, an inevitability in a Varroa-infested colony. We used a reverse genetic approach to investigate competition and interactions between genetically distinct or related virus strains, analysing viral load over time, tissue distribution with reporter gene-expressing viruses and recombination between virus variants. Transient competition occurred irrespective of the order of virus acquisition, indicating no directionality or dominance. Over longer periods, the ability to compete with a pre-existing infection correlated with the genetic divergence of the inoculae. Genetic recombination was observed throughout the DWV genome with recombinants accounting for ~2% of the population as determined by deep sequencing. We propose that superinfection exclusion, if it occurs at all, is a consequence of a cross-reactive RNAi response to the viruses involved, explaining the lack of dominance of one virus type over another. A better understanding of the consequences of dual- and superinfection will inform development of cross-protective honey bee vaccines and landscape-scale DWV transmission and evolution.

Indexed as

RNA VirusesSuperinfectionVarroidaeAnimalsBeesDNA Viruses

Identifiers

PMID34193965
PMCPMC8630095
OpenAlexW3136032054

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.