Evidence map›Paper›PMID 34193035›Full record

ArticleBMC genomics2021

Embryonic thermal manipulation impacts the postnatal transcriptome response of heat-challenged Japanese quails.

Anaïs Vitorino Carvalho, Christelle Hennequet-Antier, Aurélien Brionne, Sabine Crochet, Justine Jimenez, Nathalie Couroussé, Anne Collin, Vincent Coustham

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Anaïs Vitorino CarvalhoINRAE, Université de Tours, BOA, 37380, Nouzilly, France.
Christelle Hennequet-AntierINRAE, Université de Tours, BOA, 37380, Nouzilly, France.
Aurélien BrionneINRAE, Université de Tours, BOA, 37380, Nouzilly, France.
Sabine CrochetINRAE, Université de Tours, BOA, 37380, Nouzilly, France.
Justine JimenezINRAE, Université de Tours, BOA, 37380, Nouzilly, France.
Nathalie CourousséINRAE, Université de Tours, BOA, 37380, Nouzilly, France.
Anne CollinINRAE, Université de Tours, BOA, 37380, Nouzilly, France.
Vincent CousthamINRAE, Université de Tours, BOA, 37380, Nouzilly, France. vincent.coustham@inrae.fr.
Université de Tours · FRInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRFish Physiology and Genomics Institute · FRNutrition Metabolism Aquaculture · FR

Funding

Agence Nationale de la Recherche ANR-15-CE02-0009-01
6 · The paper itself

Abstract

backgroundThe thermal-manipulation (TM) during egg incubation is a cyclic exposure to hot or cold temperatures during embryogenesis that is associated to long-lasting effects on growth performance, physiology, metabolism and temperature tolerance in birds. An increase of the incubation temperature of Japanese quail eggs affected the embryonic and post-hatch survival, growth, surface temperatures and blood characteristics potentially related to thermoregulation capacities. To gain new insights in the molecular basis of TM in quails, we investigated by RNA-seq the hypothalamus transcriptome of 35 days-old male and female quails that were treated by TM or not (C, control) during embryogenesis and that were exposed (HC) or not (RT) to a 36 °C heat challenge for 7 h before sampling.

resultsFor males, 76, 27, 47 and 0 genes were differentially expressed in the CHC vs. CRT, CRT vs. TMRT, TMHC vs. TMRT and CHC vs. TMHC comparisons, respectively. For females, 17, 0, 342 and 1 genes were differentially expressed within the same respective comparisons. Inter-individual variability of gene expression response was observed particularly when comparing RT and HC female animals. The differential expression of several genes was corroborated by RT-qPCR analysis. Gene Ontology functional analysis of the differentially expressed genes showed a prevalent enrichment of terms related to cellular responses to stimuli and gene expression regulation in both sexes. Gene Ontology terms related to the membrane transport, the endoplasmic reticulum and mitochondrial functions as well as DNA metabolism and repair were also identified in specific comparisons and sexes.

conclusionsTM had little to no effect on the regulation of gene expression in the hypothalamus of 35 days-old Japanese quails. However, the consequences of TM on gene expression were revealed by the HC, with sex-specific and common functions altered. The effects of the HC on gene expression were most prominent in TM females with a ~ 20-fold increase of the number of differentially expressed genes, suggesting that TM may enhance the gene response during challenging conditions in female quail hypothalamus. TM may also promote new cellular strategies in females to help coping to the adverse conditions as illustrated by the identification of differentially expressed genes related to the mitochondrial and heat-response functions.

Indexed as

CoturnixHot TemperatureAnimalsChickensEmbryonic DevelopmentFemaleMaleTranscriptomeAvianEmbryonic treatmentTemperatureThermal manipulationTranscriptome

Identifiers

PMID34193035
PMCPMC8243606
OpenAlexW3175991321

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.