Evidence map›Paper›PMID 34192517›Full record

ArticleCell host & microbe2021

Vaccinia virus E3 prevents sensing of Z-RNA to block ZBP1-dependent necroptosis.

Heather Koehler, Samantha Cotsmire, Ting Zhang, Siddharth Balachandran, Jason W Upton, Jeffery Langland, Daniel Kalman, Bertram L Jacobs, Edward S Mocarski

Open access · greenAbstract read
In one paragraph

Article in Cell host & microbe, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed, 1 pooled it
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 1 synthesis or guideline pooled it, 129 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Mechanisms, regulation and clinical relevance of necroptosis.Nature reviews. Molecular cell biology · 2026
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33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Heather KoehlerDepartment of Microbiology and Immunology, Emory Vaccine Center, Emory University School of Medicine, Atlanta, GA 30322, USA.
Samantha CotsmireArizona State University, Center for Immunotherapy, Vaccines and Virotherapy, Biodesign Institute, Tempe, AZ 85287, USA.
Ting ZhangBlood Cell Development and Function Program, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Siddharth BalachandranBlood Cell Development and Function Program, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Jason W UptonDepartment of Biological Sciences, Auburn University, Auburn, AL 36849, USA.
Jeffery LanglandArizona State University, Center for Immunotherapy, Vaccines and Virotherapy, Biodesign Institute, Tempe, AZ 85287, USA.
Daniel KalmanDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, GA 30322, USA.
Bertram L JacobsArizona State University, Center for Immunotherapy, Vaccines and Virotherapy, Biodesign Institute, Tempe, AZ 85287, USA. Electronic address: bjacobs@asu.edu.
Edward S MocarskiDepartment of Microbiology and Immunology, Emory Vaccine Center, Emory University School of Medicine, Atlanta, GA 30322, USA. Electronic address: mocarski@emory.edu.
Arizona State University · USEmory University · USFox Chase Cancer Center · USAuburn University · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Dietmar J Kappes · 1985 to 2026
$138.8M
Mechanism, Function, and Exploitation of Influenza A Virus-Activated Cell DeathR01AI135025 · NIAID · RESEARCH INST OF FOX CHASE CAN CTR · PI BALACHANDRAN, SIDDHARTH · 2017 to 2025
$6.8M
CYTOMEGALOVIRUS DNA REPLICATION AND RECOMBINATIONR01AI020211 · NIAID · STANFORD UNIVERSITY · PI EDWARD S MOCARSKI, EDWARD S. · 1985 to 2021
$5.9M
Monkeypox virus, Interferon, and NecroptosisR01AI095394 · NIAID · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI JACOBS, BERTRAM L. · 2012 to 2024
$4.9M
Bacterial factors modulating host immunityR01DK074731 · NIDDK · EMORY UNIVERSITY · PI KALMAN, DANIEL · 2008 to 2018
$2.4M
Microbiota-derived indoles control epithelial barrier integrity in response to acute stressors and agingR56DK074731 · NIDDK · EMORY UNIVERSITY · PI KALMAN, DANIEL, WARMFLASH, ARYEH · 2006 to 2020
$817k
NCI NIH HHS P30 CA006927NIAID NIH HHS R01 AI020211NIAID NIH HHS R01 AI095394NIAID NIH HHS R01 AI135025NIDDK NIH HHS R01 DK074731NIDDK NIH HHS R56 DK074731
6 · The paper itself

Abstract

Necroptosis mediated by Z-nucleic-acid-binding protein (ZBP)1 (also called DAI or DLM1) contributes to innate host defense against viruses by triggering cell death to eliminate infected cells. During infection, vaccinia virus (VACV) protein E3 prevents death signaling by competing for Z-form RNA through an N-terminal Zα domain. In the absence of this E3 domain, Z-form RNA accumulates during the early phase of VACV infection, triggering ZBP1 to recruit receptor interacting protein kinase (RIPK)3 and execute necroptosis. The C-terminal E3 double-strand RNA-binding domain must be retained to observe accumulation of Z-form RNA and induction of necroptosis. Substitutions of Zα from either ZBP1 or the RNA-editing enzyme double-stranded RNA adenosine deaminase (ADAR)1 yields fully functional E3 capable of suppressing virus-induced necroptosis. Overall, our evidence reveals the importance of Z-form RNA generated during VACV infection as a pathogen-associated molecular pattern (PAMP) unleashing ZBP1/RIPK3/MLKL-dependent necroptosis unless suppressed by viral E3.

Indexed as

Adenosine DeaminaseCell DeathHumansNecroptosisProtein KinasesReceptor-Interacting Protein Serine-Threonine KinasesRNA-Binding ProteinsRNA, Double-StrandedVaccinia virusViral ProteinsADAR protein, humanAdenosine DeaminaseE3L protein, Vaccinia virusMLKL protein, humanProtein KinasesReceptor-Interacting Protein Serine-Threonine KinasesRIPK3 protein, humanRNA-Binding ProteinsRNA, Double-StrandedViral ProteinsZBP1 protein, humancell deathDAIE3LnecroptosispoxvirusVACVZBP1Z-DNA-binding domainZ-form nucleic acidZ-RNA

Identifiers

PMID34192517
PMCPMC9333947
OpenAlexW3176260084

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.