Evidence map›Paper›PMID 34191582›Full record

ArticleJournal of virology2021

Novel Host Recognition Mechanism of the K1 Capsule-Specific Phage of

Qianwen Gong, Xuhang Wang, Haosheng Huang, Yu Sun, Xinjie Qian, Feng Xue, Jianluan Ren, Jianjun Dai, Fang Tang

Abstract read
In one paragraph

Article in Journal of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

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  19. Frontiers in microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Qianwen GongMOE Joint International Research Laboratory of Animal Health and Food Safety; Key Laboratory of Animal Bacteriology, Ministry of Agriculture; and College of Veterinary Medicine, Nanjing Agricultural Universitygrid.27871.3b, Nanjing, China.
Xuhang WangMOE Joint International Research Laboratory of Animal Health and Food Safety; Key Laboratory of Animal Bacteriology, Ministry of Agriculture; and College of Veterinary Medicine, Nanjing Agricultural Universitygrid.27871.3b, Nanjing, China.
Haosheng HuangMOE Joint International Research Laboratory of Animal Health and Food Safety; Key Laboratory of Animal Bacteriology, Ministry of Agriculture; and College of Veterinary Medicine, Nanjing Agricultural Universitygrid.27871.3b, Nanjing, China.
Yu SunMOE Joint International Research Laboratory of Animal Health and Food Safety; Key Laboratory of Animal Bacteriology, Ministry of Agriculture; and College of Veterinary Medicine, Nanjing Agricultural Universitygrid.27871.3b, Nanjing, China.
Xinjie QianMOE Joint International Research Laboratory of Animal Health and Food Safety; Key Laboratory of Animal Bacteriology, Ministry of Agriculture; and College of Veterinary Medicine, Nanjing Agricultural Universitygrid.27871.3b, Nanjing, China.
Feng XueMOE Joint International Research Laboratory of Animal Health and Food Safety; Key Laboratory of Animal Bacteriology, Ministry of Agriculture; and College of Veterinary Medicine, Nanjing Agricultural Universitygrid.27871.3b, Nanjing, China.
Jianluan RenMOE Joint International Research Laboratory of Animal Health and Food Safety; Key Laboratory of Animal Bacteriology, Ministry of Agriculture; and College of Veterinary Medicine, Nanjing Agricultural Universitygrid.27871.3b, Nanjing, China.
Jianjun DaiMOE Joint International Research Laboratory of Animal Health and Food Safety; Key Laboratory of Animal Bacteriology, Ministry of Agriculture; and College of Veterinary Medicine, Nanjing Agricultural Universitygrid.27871.3b, Nanjing, China.
Fang TangMOE Joint International Research Laboratory of Animal Health and Food Safety; Key Laboratory of Animal Bacteriology, Ministry of Agriculture; and College of Veterinary Medicine, Nanjing Agricultural Universitygrid.27871.3b, Nanjing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

K1 capsule-specific phages of Escherichia coli have been reported in recent years, but the molecular mechanism involved in host recognition of these phages remains unknown. In this study, the interactions between PNJ1809-36, a new K1-specific phage, and its host bacterium, E. coli DE058, were investigated. A transposon mutation library was used to screen for receptor-related genes. Gene deletion, lysis curve determination, plaque formation test, adsorption assay, and inhibition assay of phage by lipopolysaccharide (LPS) showed that capsular polysaccharide (CPS) was the first receptor for the initial adsorption of PNJ1809-36 to E. coli DE058 and that LPS was a secondary receptor for the irreversible binding of the phage. The penultimate galactose in the outer core was identified as the specific binding region on LPS. Through antibody blocking assay, fluorescence labeling and high-performance gel permeation chromatography, the tail protein ORF261 of phage PNJ1809-36 was identified as the receptor-binding protein on CPS. Given these findings, we propose a model for the recognition process of phage PNJ1809-36 on E. coli DE058: the phage PNJ1809-36 tail protein ORF261 recognizes and adsorbs to the K1 capsule, and then the K1 capsule is partially degraded, exposing the active site of LPS which is recognized by phage PNJ1809-36. This model provides insight into the molecular mechanisms between K1-specific phages and their host bacteria.

Indexed as

Amino Acid SequenceAntigens, BacterialBacterial CapsulesBacteriophage T7Escherichia coliLipopolysaccharidesPolysaccharides, BacterialSequence Homology, Amino AcidAntigens, Bacterialcapsular polysaccharide K1LipopolysaccharidesPolysaccharides, BacterialEscherichia coliK1 capsuleLPSphagereceptor

Identifiers

PMID34191582
PMCPMC8387036

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.