Evidence map›Paper›PMID 34191384›Full record

ArticleProtein science : a publication of the Protein Society2021

Cryptic association of B7-2 molecules and its implication for clustering.

Swetha Lankipalli, Mahadeva Swamy H S, Deepak Selvam, Dibyendu Samanta, Deepak Nair, Udupi A Ramagopal

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Cryptic association of B7-2 molecules and its implication for clustering.Protein science : a publication of the Protein Society · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Swetha LankipalliBiological Sciences Division, Poornaprajna Institute of Scientific Research (PPISR), Bengaluru, India.
Mahadeva Swamy H SCentre for Neuroscience, Indian Institute of Science, Bangalore, India.
Deepak SelvamJawaharlal Nehru Center for Advance Scientific Research, Bengaluru, Karnataka, India.
Dibyendu SamantaSchool of Bioscience, Sir J. C. Bose Laboratory Complex, Indian Institute of Technology Kharagpur, Kharagpur, India.ORCID 0000-0002-5733-6694
Deepak NairCentre for Neuroscience, Indian Institute of Science, Bangalore, India.ORCID 0000-0002-2103-1653
Udupi A RamagopalBiological Sciences Division, Poornaprajna Institute of Scientific Research (PPISR), Bengaluru, India.ORCID 0000-0003-1045-9838
Indian Institute of Science Bangalore · INIndian Institute of Technology Kharagpur · INJawaharlal Nehru Centre for Advanced Scientific Research · INManipal Academy of Higher Education · INPoornaprajna Institute of Scientific Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

T-cell co-stimulation through CD28/CTLA4:B7-1/B7-2 axis is one of the extensively studied pathways that resulted in the discovery of several FDA-approved drugs for autoimmunity and cancer. However, many aspects of the signaling mechanism remain elusive, including oligomeric association and clustering of B7-2 on the cell surface. Here, we describe the structure of the IgV domain of B7-2 and its cryptic association into 1D arrays that appear to represent the pre-signaling state of B7-2 on the cell membrane. Super-resolution microscopy experiments on heterologous cells expressing B7-2 and B7-1 suggest, B7-2 form relatively elongated and larger clusters compared to B7-1. The sequence and structural comparison of other B7 family members, B7-1:CTLA4 and B7-2:CTLA-4 complex structures, support our view that the observed B7-2 1D zipper array is physiologically important. This observed 1D zipper-like array also provides an explanation for its clustering, and upright orientation on the cell surface, and avoidance of spurious signaling.

Indexed as

Amino Acid SequenceAnimalsB7-1 AntigenB7-2 AntigenBinding SitesCD28 AntigensCell Line, TumorCTLA-4 AntigenGene ExpressionHumansMiceModels, MolecularNeuronsProtein BindingProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandB7-1 AntigenB7-2 AntigenCD28 AntigensCTLA-4 AntigenCTLA4 protein, humanRecombinant ProteinsB7-2 structureimmune checkpoint blockadeimmune receptorsprotein clustering

Identifiers

PMID34191384
PMCPMC8376414
OpenAlexW3175938358

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.