Evidence map›Paper›PMID 34189378›Full record

ArticleNetwork neuroscience (Cambridge, Mass.)2021

A novel dynamic network imaging analysis method reveals aging-related fragmentation of cortical networks in mouse.

Daniel A Llano, Chihua Ma, Umberto Di Fabrizio, Aynaz Taheri, Kevin A Stebbings, Georgiy Yudintsev, Gang Xiao, Robert V Kenyon, Tanya Y Berger-Wolf

Open access · goldAbstract read
In one paragraph

Article in Network neuroscience (Cambridge, Mass.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Daniel A LlanoDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Champaign, IL, USA.ORCID https://orcid.org/0000-0003-0933-1837
Chihua MaDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
Umberto Di FabrizioDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
Aynaz TaheriDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
Kevin A StebbingsNeuroscience Program, University of Illinois at Urbana-Champaign, Champaign, IL, USA.
Georgiy YudintsevNeuroscience Program, University of Illinois at Urbana-Champaign, Champaign, IL, USA.
Gang XiaoDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Champaign, IL, USA.
Robert V KenyonDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
Tanya Y Berger-WolfDepartment of Computer Science, University of Illinois at Chicago, Chicago, IL, USA.
University of Illinois Chicago · USUniversity of Illinois Urbana-Champaign · US

Funding

Age-Related changes in GABAergic influence on auditory corticothalamic projectionR03DC012125 · NIDCD · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI LLANO, DANIEL A · 2011 to 2013
$445k
Mechanisms of exercise-induced neuroprotection in a mouse model of presbycusisR03AG059103 · NIA · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI LLANO, DANIEL A · 2019 to 2020
$141k
NIA NIH HHS R03 AG059103NIDCD NIH HHS R03 DC012125
6 · The paper itself

Abstract

Network analysis of large-scale neuroimaging data is a particularly challenging computational problem. Here, we adapt a novel analytical tool, the community dynamic inference method (CommDy), for brain imaging data from young and aged mice. CommDy, which was inspired by social network theory, has been successfully used in other domains in biology; this report represents its first use in neuroscience. We used CommDy to investigate aging-related changes in network metrics in the auditory and motor cortices by using flavoprotein autofluorescence imaging in brain slices and in vivo. We observed that auditory cortical networks in slices taken from aged brains were highly fragmented compared to networks observed in young animals. CommDy network metrics were then used to build a random-forests classifier based on NMDA receptor blockade data, which successfully reproduced the aging findings, suggesting that the excitatory cortical connections may be altered during aging. A similar aging-related decline in network connectivity was also observed in spontaneous activity in the awake motor cortex, suggesting that the findings in the auditory cortex reflect general mechanisms during aging. These data suggest that CommDy provides a new dynamic network analytical tool to study the brain and that aging is associated with fragmentation of intracortical networks.

Indexed as

AgingAuditory cortexMotor cortexNetwork analysisNMDAPresbycusisRandom forest

Identifiers

PMID34189378
PMCPMC8233117
OpenAlexW3140767214

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.