Evidence map›Paper›PMID 34188789›Full record

ArticleJournal of healthcare engineering2021

The Function and Prognostic Value of RNA-Binding Proteins in Colorectal Adenocarcinoma Were Analyzed Based on Bioinformatics of Smart Medical Big Data.

Haoran Zhao, Peng Wang, Haishi Liu, Yueyang Li, Qian Luo, Man Li, Yubao Zhang, Zengfu Song

RetractedOpen access · hybridAbstract readRetracted Publication
In one paragraph

Article in Journal of healthcare engineering, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 63% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Haoran ZhaoDepartment of Hepatopancreatobiliary Surgery, Harbin Medical University Cancer Hospital, Harbin, China.ORCID 0000-0002-0859-4136
Peng WangDepartment of Hepatopancreatobiliary Surgery, Harbin Medical University Cancer Hospital, Harbin, China.
Haishi LiuDepartment of Hepatopancreatobiliary Surgery, Harbin Medical University Cancer Hospital, Harbin, China.
Yueyang LiDepartment of Hepatopancreatobiliary Surgery, Harbin Medical University Cancer Hospital, Harbin, China.
Qian LuoDepartment of Hepatopancreatobiliary Surgery, Harbin Medical University Cancer Hospital, Harbin, China.
Man LiDepartment of Hepatopancreatobiliary Surgery, Harbin Medical University Cancer Hospital, Harbin, China.
Yubao ZhangDepartment of Hepatopancreatobiliary Surgery, Harbin Medical University Cancer Hospital, Harbin, China.ORCID 0000-0001-8991-4906
Zengfu SongDepartment of Hepatopancreatobiliary Surgery, Harbin Medical University Cancer Hospital, Harbin, China.
Harbin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colon cancer is the third most frequent cancer in the world and is mainly adenocarcinoma in terms of pathological type. It has been confirmed that the dysregulation of RNA-binding proteins (RBPs) significantly participates in the occurrence and development of numerous malignant tumors. Therefore, we analyzed the RBPs associated with colon adenocarcinoma (COAD) to assess their possible biological effects and prognostic value. A total of 398 COAD tissue datasets and 39 normal tissue datasets were retrieved from the TCGA data resource and screened out the RBPs, which are differentially expressed between tumor tissues and nontumor tissues. Then, bioinformatics analyses based on smart medical big data were conducted on these RBPs. Overall, 181 differentially expressed RBPs were uncovered, consisting of 121 upregulated RBPs and 60 downregulated RBPs. Finally, we selected 7 prognostic-related RBPs with research prospects and constructed a prognostic model according to the median risk score. There were remarkable differences in OS between the high-risk and low-risk groups. In addition, the performance of the prognostic model was evaluated and verified with other COAD patient data in the TCGA database. The results showed that the area under the ROC curve (AUC) for the train group was 0.744 and the one for the test group was 0.661, confirming that the model assesses patients' prognosis to some extent. And based on 7 hub RBPs, we constructed a nomogram as a reference for evaluating the survival rate of COAD patients.

Indexed as

AdenocarcinomaColorectal NeoplasmsBig DataBiomarkers, TumorComputational BiologyGene Expression Regulation, NeoplasticHumansPrognosisRNA-Binding ProteinsBiomarkers, TumorRNA-Binding Proteins

Identifiers

PMID34188789
PMCPMC8192207
OpenAlexW3168457156

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.