Evidence map›Paper›PMID 34188187›Full record

ArticleCommunications biology2021

Phylogenomics illuminates the evolution of bobtail and bottletail squid (order Sepiolida).

Gustavo Sanchez, Fernando Á Fernández-Álvarez, Morag Taite, Chikatoshi Sugimoto, Jeffrey Jolly, Oleg Simakov, Ferdinand Marlétaz, Louise Allcock, Daniel S Rokhsar

Abstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Atlantic Oceanic Squids in the "Grey Speciation Zone".Integrative and comparative biology · 2023
    Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Gustavo Sanchez *Graduate School of Integrated Science for Life, Hiroshima University, Higashi Hiroshima, Hiroshima, Japan.ORCID 0000-0002-6490-2842
Fernando Á Fernández-Álvarez *Ryan Institute and School of Natural Sciences, National University of Ireland Galway, Galway, Ireland, UK.ORCID 0000-0002-8679-7377
Morag TaiteRyan Institute and School of Natural Sciences, National University of Ireland Galway, Galway, Ireland, UK.
Chikatoshi SugimotoMolecular Genetics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, Japan.
Jeffrey JollyMolecular Genetics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, Japan.
Oleg SimakovDepartment of Molecular Evolution and Development, University of Vienna, Vienna, Austria.ORCID 0000-0002-3585-4511
Ferdinand MarlétazDepartment of Genetics, Evolution and Environment, Centre for Life's Origins and Evolution, University College London, London, UK.
Louise AllcockRyan Institute and School of Natural Sciences, National University of Ireland Galway, Galway, Ireland, UK.ORCID 0000-0002-4806-0040
Daniel S RokhsarMolecular Genetics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, Japan. dsrokhsar@gmail.com.ORCID 0000-0002-8704-2224

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bobtail and bottletail squid are small cephalopods with striking anti-predatory defensive mechanisms, bioluminescence, and complex morphology; that inhabit nektobenthic and pelagic environments around the world's oceans. Yet, the evolution and diversification of these animals remain unclear. Here, we used shallow genome sequencing of thirty-two bobtail and bottletail squids to estimate their evolutionary relationships and divergence time. Our phylogenetic analyses show that each of Sepiadariidae, Sepiolidae, and the three subfamilies of the Sepiolidae are monophyletic. We found that the ancestor of the Sepiolinae very likely possessed a bilobed light organ with bacteriogenic luminescence. Sepiolinae forms a sister group to Rossinae and Heteroteuthinae, and split into Indo-Pacific and Atlantic-Mediterranean lineages. The origin of these lineages coincides with the end of the Tethys Sea and the separation of these regions during the Eocene and the beginning of the Oligocene. We demonstrated that sepiolids radiated after the Late Cretaceous and that major biogeographic events might have shaped their distribution and speciation.

Indexed as

Evolution, MolecularPhylogenyAnimalsDecapodiformesLuminescence

Identifiers

PMID34188187
PMCPMC8241861

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.