Evidence map›Paper›PMID 34188171›Full record

ArticleCommunications biology2021

Structure and lipid dynamics in the maintenance of lipid asymmetry inner membrane complex of A. baumannii.

Daniel Mann, Junping Fan, Kamolrat Somboon, Daniel P Farrell, Andrew Muenks, Svetomir B Tzokov, Frank DiMaio, Syma Khalid, Samuel I Miller, Julien R C Bergeron

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  4. Large-scale combination screens reveal small-molecule sensitization of antibiotic-resistant gram-negative ESKAPE pathogens.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  6. Proteome Changes Induced by Iprodione Exposure in the Pesticide-TolerantInternational journal of molecular sciences · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. A periplasmic phospholipase that maintains outer membrane lipid asymmetry inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. CHARMM-GUIJournal of chemical theory and computation · 2023
    Review
  16. Review
  17. ABC Transporters in Bacterial Nanomachineries.International journal of molecular sciences · 2023
    Review
  18. Article
  19. Natural and Man-Made Cyclic Peptide-Based Antibiotics.Antibiotics (Basel, Switzerland) · 2022
    Review
  20. CHARMM-GUI Enhanced Sampler for various collective variables and enhanced sampling methods.Protein science : a publication of the Protein Society · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Daniel MannDepartment of Molecular Biology and Biotechnology, The University of Sheffield, Sheffield, UK.ORCID 0000-0002-9106-9358
Junping Fan *Department of Microbiology, The University of Washington, Seattle, USA.
Kamolrat Somboon *Department of Chemistry, University of Southampton, Southampton, UK.
Daniel P FarrellDepartment of Biochemistry, The University of Washington, Seattle, USA.ORCID 0000-0001-7024-7998
Andrew MuenksDepartment of Biochemistry, The University of Washington, Seattle, USA.
Svetomir B TzokovDepartment of Molecular Biology and Biotechnology, The University of Sheffield, Sheffield, UK.ORCID 0000-0001-7256-5279
Frank DiMaioDepartment of Biochemistry, The University of Washington, Seattle, USA.
Syma KhalidDepartment of Chemistry, University of Southampton, Southampton, UK.
Samuel I MillerDepartment of Microbiology, The University of Washington, Seattle, USA.ORCID 0000-0003-1638-2181
Julien R C BergeronDepartment of Molecular Biology and Biotechnology, The University of Sheffield, Sheffield, UK. julien.bergeron@kcl.ac.uk.ORCID 0000-0002-2841-9511
University of Washington · USUniversity of Southampton · GBForschungszentrum Jülich · DEKing's College London · GBUniversity of Sheffield · GB

Funding

Protein structure determination from low-resolution experimental dataR01GM123089 · NIGMS · UNIVERSITY OF WASHINGTON · PI DIMAIO, FRANK P · 2017 to 2025
$2.6M
Biotechnology and Biological Sciences Research Council BB/R019061/1NIGMS NIH HHS R01 GM123089
6 · The paper itself

Abstract

Multi-resistant bacteria are a major threat in modern medicine. The gram-negative coccobacillus Acinetobacter baumannii currently leads the WHO list of pathogens in critical need for new therapeutic development. The maintenance of lipid asymmetry (MLA) protein complex is one of the core machineries that transport lipids from/to the outer membrane in gram-negative bacteria. It also contributes to broad-range antibiotic resistance in several pathogens, most prominently in A. baumannii. Nonetheless, the molecular details of its role in lipid transport has remained largely elusive. Here, we report the cryo-EM maps of the core MLA complex, MlaBDEF, from the pathogen A. baumannii, in the apo-, ATP- and ADP-bound states, revealing multiple lipid binding sites in the cytosolic and periplasmic side of the complex. Molecular dynamics simulations suggest their potential trajectory across the membrane. Collectively with the recently-reported structures of the E. coli orthologue, this data also allows us to propose a molecular mechanism of lipid transport by the MLA system.

Indexed as

Acinetobacter baumanniiAdenosine TriphosphateBinding SitesCell MembraneCryoelectron MicroscopyMembrane LipidsMolecular Dynamics SimulationAdenosine TriphosphateMembrane Lipids

Identifiers

PMID34188171
PMCPMC8241846
OpenAlexW3177164912

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.