Evidence map›Paper›PMID 34187895›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

DOT1L complex regulates transcriptional initiation in human erythroleukemic cells.

Aiwei Wu, Junhong Zhi, Tian Tian, Ali Cihan, Murat A Cevher, Ziling Liu, Yael David, Tom W Muir, Robert G Roeder, Ming Yu

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 58 citations in OpenAlex.

  1. Review
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  14. Discovery of the first-in-class DOT1L PROTAC degrader.European journal of medicinal chemistry · 2025
    Article
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  18. DOT1L-mediated RAP80 methylation promotes BRCA1 recruitment to elicit DNA repair.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Aiwei WuSheng Yushou Center of Cell Biology and Immunology, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0001-8531-4815
Junhong ZhiSheng Yushou Center of Cell Biology and Immunology, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0002-8342-4065
Tian TianSheng Yushou Center of Cell Biology and Immunology, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.ORCID 0000-0001-8891-0858
Ali CihanLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY 10065.
Murat A CevherLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY 10065.
Ziling LiuSheng Yushou Center of Cell Biology and Immunology, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China.
Yael DavidDepartment of Chemistry, Princeton University, Princeton, NJ 08540.
Tom W MuirDepartment of Chemistry, Princeton University, Princeton, NJ 08540.ORCID 0000-0001-9635-0344
Robert G RoederLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY 10065; roeder@rockefeller.edu mingyu@sjtu.edu.cn.ORCID 0000-0003-3865-8572
Ming YuSheng Yushou Center of Cell Biology and Immunology, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; roeder@rockefeller.edu mingyu@sjtu.edu.cn.ORCID 0000-0002-4107-5653
Shanghai Jiao Tong University · CNPrinceton University · USRockefeller University · USBilkent University · TR

Funding

Functional and Mechanistic Study of Histone Crotonylation in Hematological MalignanciesR01CA204639 · NCI · ROCKEFELLER UNIVERSITY · PI ALLIS, CHARLES DAVID, ARMSTRONG, SCOTT A · 2016 to 2020
$3.5M
Transcriptional regulatory mechanisms in B cell development and leukemogenesisR01CA178765 · NCI · ROCKEFELLER UNIVERSITY · PI ROEDER, ROBERT G · 2013 to 2017
$2.8M
NCI NIH HHS R01 CA178765NCI NIH HHS R01 CA204639
6 · The paper itself

Abstract

DOT1L, the only H3K79 methyltransferase in human cells and a homolog of the yeast Dot1, normally forms a complex with AF10, AF17, and ENL or AF9, is dysregulated in most cases of mixed-lineage leukemia (MLLr), and has been believed to regulate transcriptional elongation on the basis of its colocalization with RNA polymerase II (Pol II), the sharing of subunits (AF9 and ENL) between the DOT1L and super elongation complexes, and the distribution of H3K79 methylation on both promoters and transcribed regions of active genes. Here we show that DOT1L depletion in erythroleukemic cells reduces its global occupancy without affecting the traveling ratio or the elongation rate (assessed by 4sUDRB-seq) of Pol II, suggesting that DOT1L does not play a major role in elongation in these cells. In contrast, analyses of transcription initiation factor binding reveal that DOT1L and ENL depletions each result in reduced TATA binding protein (TBP) occupancies on thousands of genes. More importantly, DOT1L and ENL depletions concomitantly reduce TBP and Pol II occupancies on a significant fraction of direct (DOT1L-bound) target genes, indicating a role for the DOT1L complex in transcription initiation. Mechanistically, proteomic and biochemical studies suggest that the DOT1L complex may regulate transcriptional initiation by facilitating the recruitment or stabilization of transcription factor IID, likely in a monoubiquitinated H2B (H2Bub1)-enhanced manner. Additional studies show that DOT1L enhances H2Bub1 levels by limiting recruitment of the Spt-Ada-Gcn5-acetyltransferase (SAGA) complex. These results advance our understanding of roles of the DOT1L complex in transcriptional regulation and have important implications for MLLr leukemias.

Indexed as

Transcription Initiation, GeneticCell Line, TumorChromatinGene Expression Regulation, LeukemicHistone-Lysine N-MethyltransferaseHistonesHumansLeukemia, Erythroblastic, AcuteProtein BindingRNA Polymerase IITranscriptional Elongation FactorsTranscription Elongation, GeneticTranscription Factor TFIIDUbiquitinationChromatinDOT1L protein, humanELL protein, humanHistone-Lysine N-MethyltransferaseHistonesRNA Polymerase IITranscriptional Elongation FactorsTranscription Factor TFIIDDOT1L complexH2B monoubiquitinationSAGATFIIDtranscriptional initiation

Identifiers

PMID34187895
PMCPMC8271641
OpenAlexW3177028999

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.