Evidence map›Paper›PMID 34187543›Full record

ArticleMolecular brain2021

In vivo imaging of immediate early gene expression dynamics segregates neuronal ensemble of memories of dual events.

P Meenakshi, S Kumar, J Balaji

Open access · goldAbstract read
In one paragraph

Article in Molecular brain, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  6. Regulation ofInternational journal of molecular sciences · 2025
    Review
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  9. Hyperactive delta isoform of PI3 kinase enables long-distance regeneration of adult rat corticospinal tract.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
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  16. Real-time visualization of mRNA synthesis during memory formation in live mice.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

P MeenakshiCentre for Neurosciences, Indian Institute of Science, Bangalore, 560012, India.ORCID 0000-0002-0711-5762
S KumarCentre for Neurosciences, Indian Institute of Science, Bangalore, 560012, India.
J BalajiCentre for Neurosciences, Indian Institute of Science, Bangalore, 560012, India. jbalaji@iisc.ac.in.ORCID 0000-0002-4442-6981
Indian Institute of Science Bangalore · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Identification of neurons undergoing plasticity in response to external stimuli is one of the pertinent problems in neuroscience. Immediate early genes (IEGs) are widely used as a marker for neuronal plasticity. Here, we model the dynamics of IEG expression as a consecutive, irreversible first-order reaction with a limiting substrate. First, we develop an analytical framework to show that such a model, together with two-photon in vivo imaging of IEG expression, can be used to identify distinct neuronal subsets representing multiple memories. Using the above combination, we show that the expression kinetics, rather than intensity threshold, can be used to identify neuronal ensembles responding to the presentation of two events in vivo. The analytical expression allowed us to segregate the neurons based on their temporal response to one specific behavioural event, thereby improving the ability to detect plasticity related neurons. We image the retrosplenial cortex (RSc) of cfos-GFP transgenic mice to follow the dynamics of cellular changes resulting from contextual fear conditioning behaviour, enabling us to establish a representation of context in RSc at the cellular scale following memory acquisition. Thus, we obtain a general method that distinguishes neurons that took part in multiple temporally separated events by measuring fluorescence of individual neurons in live mice.

Indexed as

Gene Expression RegulationGenes, Immediate-EarlyImaging, Three-DimensionalAnimalsBehavior, AnimalFluorescenceGreen Fluorescent ProteinsKineticsMemoryMice, TransgenicNeuronal PlasticityNeuronsProto-Oncogene Proteins c-fosTime Factorsenhanced green fluorescent proteinGreen Fluorescent ProteinsProto-Oncogene Proteins c-foscfos expressionDual context exposureIEGsIn vivo imagingNeuronal ensemblesRetrosplenial cortexTwo-photon

Identifiers

PMID34187543
PMCPMC8243579
OpenAlexW3173192141

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.