Evidence map›Paper›PMID 34187467›Full record

ArticleMicrobial cell factories2021

Redirection of the central metabolism of Klebsiella pneumoniae towards dihydroxyacetone production.

Shaoqi Sun, Yike Wang, Lin Shu, Xiyang Lu, Qinghui Wang, Chenguang Zhu, Jiping Shi, Gary J Lye, Frank Baganz, Jian Hao

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Shaoqi SunLab of Biorefinery, Shanghai Advanced Research Institute, Chinese Academy of Sciences, No. 99 Haike Road, Pudong, Shanghai, 201210, People's Republic of China.
Yike WangLab of Biorefinery, Shanghai Advanced Research Institute, Chinese Academy of Sciences, No. 99 Haike Road, Pudong, Shanghai, 201210, People's Republic of China.
Lin ShuLab of Biorefinery, Shanghai Advanced Research Institute, Chinese Academy of Sciences, No. 99 Haike Road, Pudong, Shanghai, 201210, People's Republic of China.
Xiyang LuLab of Biorefinery, Shanghai Advanced Research Institute, Chinese Academy of Sciences, No. 99 Haike Road, Pudong, Shanghai, 201210, People's Republic of China.
Qinghui WangLab of Biorefinery, Shanghai Advanced Research Institute, Chinese Academy of Sciences, No. 99 Haike Road, Pudong, Shanghai, 201210, People's Republic of China.
Chenguang ZhuSchool of Life Science, Shanghai University, Shanghai, 200444, People's Republic of China.
Jiping ShiLab of Biorefinery, Shanghai Advanced Research Institute, Chinese Academy of Sciences, No. 99 Haike Road, Pudong, Shanghai, 201210, People's Republic of China.
Gary J LyeDepartment of Biochemical Engineering, University College London, Gordon Street, London, WC1H 0AH, UK.
Frank BaganzDepartment of Biochemical Engineering, University College London, Gordon Street, London, WC1H 0AH, UK. f.baganz@ucl.ac.uk.
Jian HaoLab of Biorefinery, Shanghai Advanced Research Institute, Chinese Academy of Sciences, No. 99 Haike Road, Pudong, Shanghai, 201210, People's Republic of China. haoj@sari.ac.cn.ORCID http://orcid.org/0000-0002-4403-8188
Chinese Academy of Sciences · CNShanghai University · CNUniversity College London · GBShanghai Advanced Research Institute · CN

Funding

National Key R&D Program of China 2017YFE0112700National Key R&D Program of China 2019YFE019690Natural Science Foundation of Shanghai 19ZR146360
6 · The paper itself

Abstract

backgroundKlebsiella pneumoniae is a bacterium that can be used as producer for numerous chemicals. Glycerol can be catabolised by K. pneumoniae and dihydroxyacetone is an intermediate of this catabolism pathway. Here dihydroxyacetone and glycerol were produced from glucose by this bacterium based a redirected glycerol catabolism pathway.

resultstpiA, encoding triosephosphate isomerase, was knocked out to block the further catabolism of dihydroxyacetone phosphate in the glycolysis. After overexpression of a Corynebacterium glutamicum dihydroxyacetone phosphate dephosphorylase (hdpA), the engineered strain produced remarkable levels of dihydroxyacetone (7.0 g/L) and glycerol (2.5 g/L) from glucose. Further increase in product formation were obtained by knocking out gapA encoding an iosenzyme of glyceraldehyde 3-phosphate dehydrogenase. There are two dihydroxyacetone kinases in K. pneumoniae. They were both disrupted to prevent an inefficient reaction cycle between dihydroxyacetone phosphate and dihydroxyacetone, and the resulting strains had a distinct improvement in dihydroxyacetone and glycerol production. pH 6.0 and low air supplement were identified as the optimal conditions for dihydroxyacetone and glycerol production by K, pneumoniae ΔtpiA-ΔDHAK-hdpA. In fed batch fermentation 23.9 g/L of dihydroxyacetone and 10.8 g/L of glycerol were produced after 91 h of cultivation, with the total conversion ratio of 0.97 mol/mol glucose.

conclusionsThis study provides a novel and highly efficient way of dihydroxyacetone and glycerol production from glucose.

Indexed as

DihydroxyacetoneDihydroxyacetone PhosphateDiphosphoglyceric AcidsFermentationGenes, BacterialGlucoseGlyceraldehyde 3-PhosphateGlyceraldehyde-3-Phosphate DehydrogenasesGlycerolHydrogen-Ion ConcentrationKlebsiella pneumoniaeMetabolic EngineeringMetabolic Networks and PathwaysPhosphotransferases (Alcohol Group Acceptor)ThermodynamicsDihydroxyacetoneDihydroxyacetone PhosphateDiphosphoglyceric AcidsGlucoseGlyceraldehyde 3-PhosphateGlyceraldehyde-3-Phosphate Dehydrogenasesglycerate 1,3-biphosphateGlycerolglycerone kinasePhosphotransferases (Alcohol Group Acceptor)DihydroxyacetoneGlycerolhdpAKlebsiella pneumoniaetpiA

Identifiers

PMID34187467
PMCPMC8243499
OpenAlexW3174692666

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.