Evidence map›Paper›PMID 34185961›Full record

ArticleMolecular oncology2021

Early detection of hepatocellular carcinoma via liquid biopsy: panel of small extracellular vesicle-derived long noncoding RNAs identified as markers.

Soon Sun Kim, Geum Ok Baek, Ju A Son, Hye Ri Ahn, Moon Kyung Yoon, Hyo Jung Cho, Jung Hwan Yoon, Suk Woo Nam, Jae Youn Cheong, Jung Woo Eun

Open access · goldAbstract read
In one paragraph

Article in Molecular oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 3 pooled it
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 3 syntheses or guidelines pooled it, 48 citations in OpenAlex.

  1. Pooled it
  2. Combinatorial Gene Expression Profiling of SerumInternational journal of molecular sciences · 2024
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  18. Deleted in lymphocytic leukemia 2 (DLEU2): a possible biomarker that holds promise for future diagnosis and treatment of cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Soon Sun KimDepartment of Gastroenterology, Ajou University School of Medicine, Suwon, South Korea.ORCID 0000-0002-6862-1896
Geum Ok BaekDepartment of Gastroenterology, Ajou University School of Medicine, Suwon, South Korea.ORCID 0000-0003-0124-8844
Ju A SonDepartment of Gastroenterology, Ajou University School of Medicine, Suwon, South Korea.ORCID 0000-0002-1601-5042
Hye Ri AhnDepartment of Gastroenterology, Ajou University School of Medicine, Suwon, South Korea.ORCID 0000-0001-5056-2085
Moon Kyung YoonDepartment of Gastroenterology, Ajou University School of Medicine, Suwon, South Korea.ORCID 0000-0003-4673-2429
Hyo Jung ChoDepartment of Gastroenterology, Ajou University School of Medicine, Suwon, South Korea.ORCID 0000-0003-4792-8335
Jung Hwan YoonDepartment of Pathology, Functional RNomics Research Center, College of Medicine, The Catholic University of Korea, Seoul, South Korea.ORCID 0000-0001-7770-2965
Suk Woo NamDepartment of Pathology, Functional RNomics Research Center, College of Medicine, The Catholic University of Korea, Seoul, South Korea.ORCID 0000-0001-5767-8291
Jae Youn CheongDepartment of Gastroenterology, Ajou University School of Medicine, Suwon, South Korea.ORCID 0000-0001-6246-1783
Jung Woo EunDepartment of Gastroenterology, Ajou University School of Medicine, Suwon, South Korea.ORCID 0000-0002-2461-6702
Ajou University · KRCatholic University of Korea · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study investigated the diagnostic potential of serum small extracellular vesicle-derived long noncoding RNAs (EV-lncRNAs) for hepatocellular carcinoma (HCC). Driver oncogenic lncRNA candidates were selected by a comparative analysis of lncRNA expression profiles from two whole transcriptome human HCC datasets (Catholic_LIHC and TCGA_LIHC). Expression of selected lncRNAs in serum and small EVs was evaluated using quantitative reverse transcription PCR. Diagnostic power of serum EV-lncRNAs for HCC was determined in the test (n = 44) and validation (n = 139) cohorts. Of the six promising driver onco-lncRNAs, DLEU2, HOTTIP, MALAT1, and SNHG1 exhibited favorable performance in the test cohort. In the validation cohort, serum EV-MALAT1 displayed excellent discriminant ability, while EV-DLEU2, EV-HOTTIP, and EV-SNHG1 showed good discriminant ability between HCC and non-HCC. Furthermore, a panel combining EV-MALAT1 and EV-SNHG1 achieved the best area under the curve (AUC; 0.899, 95% CI = 0.816-0.982) for very early HCC, whereas a panel with EV-DLEU2 and alpha-fetoprotein exhibited the best positivity (96%) in very early HCC. Serum small EV-MALAT1, EV-DLEU2, EV-HOTTIP, and EV-SNHG1 may represent promising diagnostic markers for very early-stage HCC.

Indexed as

Carcinoma, HepatocellularExtracellular VesiclesLiver NeoplasmsRNA, Long NoncodingRNA, Small UntranslatedBiomarkers, TumorGene Expression Regulation, NeoplasticHumansLiquid BiopsyBiomarkers, TumorRNA, Long NoncodingRNA, Small Untranslatedextracellular vesiclehepatocellular carcinomaliquid biopsylncRNAMALAT1

Identifiers

PMID34185961
PMCPMC8486572
OpenAlexW3176570216

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.