Evidence map›Paper›PMID 34185074›Full record

ArticleGenome biology and evolution2021

Evolution of Recombination Landscapes in Diverging Populations of Bread Wheat.

Alice Danguy des Déserts, Sophie Bouchet, Pierre Sourdille, Bertrand Servin

Abstract read
In one paragraph

Article in Genome biology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Review
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  6. Review
  7. Article
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  11. Article
  12. The recombination landscape of introgression in yeast.bioRxiv : the preprint server for biology · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Frontiers in plant science · 2023
    Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Alice Danguy des DésertsINRAE-Université Clermont-Auvergne, UMR1095, Génétique Diversité Ecophysiologie des Céréales, Clermont-Ferrand, France.
Sophie BouchetINRAE-Université Clermont-Auvergne, UMR1095, Génétique Diversité Ecophysiologie des Céréales, Clermont-Ferrand, France.
Pierre SourdilleINRAE-Université Clermont-Auvergne, UMR1095, Génétique Diversité Ecophysiologie des Céréales, Clermont-Ferrand, France.ORCID 0000-0002-1027-2224
Bertrand ServinINRAE, Université de Toulouse, GenPhySE, Castanet-Tolosan, France.ORCID 0000-0001-5141-0913

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reciprocal exchanges of DNA (crossovers) that occur during meiosis are mandatory to ensure the production of fertile gametes in sexually reproducing species. They also contribute to shuffle parental alleles into new combinations thereby fueling genetic variation and evolution. However, due to biological constraints, the recombination landscape is highly heterogeneous along the genome which limits the range of allelic combinations and the adaptability of populations. An approach to better understand the constraints on the recombination process is to study how it evolved in the past. In this work, we tackled this question by constructing recombination profiles in four diverging bread wheat (Triticum aestivum L.) populations established from 371 landraces genotyped at 200,062 SNPs. We used linkage disequilibrium (LD) patterns to estimate in each population the past distribution of recombination along the genome and characterize its fine-scale heterogeneity. At the megabase scale, recombination rates derived from LD patterns were consistent with family-based estimates obtained from a population of 406 recombinant inbred lines. Among the four populations, recombination landscapes were positively correlated between each other and shared a statistically significant proportion of highly recombinant intervals. However, this comparison also highlighted that the similarity in recombination landscapes between populations was significantly decreasing with their genetic differentiation in most regions of the genome. This observation was found to be robust to SNPs ascertainment and demography and suggests a relatively rapid evolution of factors determining the fine-scale localization of recombination in bread wheat.

Indexed as

BreadTriticumChromosome MappingLinkage DisequilibriumRecombination, Geneticbread wheatevolutionrecombination

Identifiers

PMID34185074
PMCPMC8350361

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.