Evidence map›Paper›PMID 34184183›Full record

ArticleVirus genes2021

A novel ampelovirus associated with mealybug wilt of pineapple (Ananas comosus).

Adriana Larrea-Sarmiento, Alejandro Olmedo-Velarde, Xupeng Wang, Wayne Borth, Tracie K Matsumoto, Jon Y Suzuki, Marisa M Wall, Michael Melzer, John Hu

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Genetic Diversity of Viral Populations Associated withPathogens (Basel, Switzerland) · 2022
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Adriana Larrea-SarmientoDepartment of Plant and Environmental Protection Sciences, University of Hawaii, Honolulu, HI, USA.
Alejandro Olmedo-VelardeDepartment of Plant and Environmental Protection Sciences, University of Hawaii, Honolulu, HI, USA.
Xupeng WangDepartment of Plant and Environmental Protection Sciences, University of Hawaii, Honolulu, HI, USA.
Wayne BorthDepartment of Plant and Environmental Protection Sciences, University of Hawaii, Honolulu, HI, USA.
Tracie K MatsumotoUnited States Department of Agriculture, Agricultural Research Service, Daniel K. Inouye U. S. Pacific Basin Agricultural Research Center, Hilo, HI, USA.
Jon Y SuzukiUnited States Department of Agriculture, Agricultural Research Service, Daniel K. Inouye U. S. Pacific Basin Agricultural Research Center, Hilo, HI, USA.
Marisa M WallUnited States Department of Agriculture, Agricultural Research Service, Daniel K. Inouye U. S. Pacific Basin Agricultural Research Center, Hilo, HI, USA.
Michael MelzerDepartment of Plant and Environmental Protection Sciences, University of Hawaii, Honolulu, HI, USA.
John HuDepartment of Plant and Environmental Protection Sciences, University of Hawaii, Honolulu, HI, USA. johnhu@hawaii.edu.ORCID http://orcid.org/0000-0003-3003-4140

Funding

Agricultural Research Service 58-5320-4-012National Institute of Food and Agriculture Hatch HAW09025-H (1001478)
6 · The paper itself

Abstract

Mealybug wilt of pineapple (MWP) is the most important and complex viral disease affecting pineapple worldwide. High-throughput sequencing was conducted to characterize a new virus identified only in symptomatic pineapple plants and tentatively named pineapple mealybug wilt-associated virus 6 (PMWaV-6). Data analyses revealed a genome of 17,854 nucleotides with an organization resembling members of the genus Ampelovirus, family Closteroviridae. Encoded proteins shared sequence identity with the corresponding proteins of grapevine leafroll-associated virus 3, blackberry vein banding-associated virus, and PMWaV-2. The present study reports the discovery of PMWaV-6, a putative and distinct new member of the genus Ampelovirus, subgroup I, its potential involvement in MWP, and the development of PMWaV-6-specific RT-PCR assays to detect and monitor this virus in field samples.

Indexed as

AnanasClosteroviridaeGenome, ViralHumansOpen Reading FramesPhylogenyPlant DiseasesRNA, ViralRNA, ViralAmpelovirusHigh-throughput sequencingMealybug wilt of pineappleNovel virus

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.