Evidence map›Paper›PMID 34183837›Full record

ArticleNature medicine2021

Self-tunable engineered yeast probiotics for the treatment of inflammatory bowel disease.

Benjamin M Scott, Cristina Gutiérrez-Vázquez, Liliana M Sanmarco, Jessica A da Silva Pereira, Zhaorong Li, Agustín Plasencia, Patrick Hewson, Laura M Cox, Madelynn O'Brien, Steven K Chen and 4 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 135 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
135citing papers in PubMed, 2 pooled it
29.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

135 citing papers in PubMed, 2 syntheses or guidelines pooled it, 263 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Synthetic and systems biotechnology · 2027
    Review
  4. Review
  5. Article
  6. Review
  7. Review
  8. Review
  9. Living Microbial Drugs.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Review
  10. Review
  11. Article
  12. Review
  13. Nutrients · 2026
    Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Current and emerging approaches to manage chronic inflammatory gut disorders.Frontiers in cellular and infection microbiology · 2026
    Review

75 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Benjamin M Scott *Department of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0003-4782-7139
Cristina Gutiérrez-Vázquez *Ann Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-3846-4631
Liliana M SanmarcoAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Jessica A da Silva PereiraAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-8503-1732
Zhaorong LiAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-5268-6986
Agustín PlasenciaAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0002-7415-0947
Patrick HewsonAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Laura M CoxAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Madelynn O'BrienAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Steven K ChenDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0001-5008-4351
Pedro M Moraes-VieiraDepartment of Genetics, Evolution, Microbiology and Immunology, Institute of Biology; Experimental Medicine Research Cluster (EMRC), and Obesity and Comorbidities Research Center (OCRC), University of Campinas, Campinas, Brazil.
Belinda S W ChangDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.
Sergio G PeisajovichDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.
Francisco J QuintanaAnn Romney Center for Neurologic Diseases, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA. fquintana@rics.bwh.harvard.edu.ORCID http://orcid.org/0000-0001-8156-0736
Brigham and Women's Hospital · USUniversity of Toronto · CABroad Institute · USIllumina (United States) · USNational Institute of Standards and Technology · USUniversidade Estadual de Campinas (UNICAMP) · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inflammatory bowel disease (IBD) is a complex chronic inflammatory disorder of the gastrointestinal tract. Extracellular adenosine triphosphate (eATP) produced by the commensal microbiota and host cells activates purinergic signaling, promoting intestinal inflammation and pathology. Based on the role of eATP in intestinal inflammation, we developed yeast-based engineered probiotics that express a human P2Y2 purinergic receptor with up to a 1,000-fold increase in eATP sensitivity. We linked the activation of this engineered P2Y2 receptor to the secretion of the ATP-degrading enzyme apyrase, thus creating engineered yeast probiotics capable of sensing a pro-inflammatory molecule and generating a proportional self-regulated response aimed at its neutralization. These self-tunable yeast probiotics suppressed intestinal inflammation in mouse models of IBD, reducing intestinal fibrosis and dysbiosis with an efficacy similar to or higher than that of standard-of-care therapies usually associated with notable adverse events. By combining directed evolution and synthetic gene circuits, we developed a unique self-modulatory platform for the treatment of IBD and potentially other inflammation-driven pathologies.

Indexed as

Adenosine TriphosphateAnimalsApyraseCRISPR-Cas SystemsDisease Models, AnimalDysbiosisFemaleFibrosisGastrointestinal MicrobiomeGastrointestinal TractHumansInflammatory Bowel DiseasesMaleMiceMice, Inbred C57BLProbioticsAdenosine TriphosphateApyraseReceptors, Purinergic P2Y2

Identifiers

PMID34183837
OpenAlexW3173777885

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.