Evidence map›Paper›PMID 34183716›Full record

ArticleScientific reports2021

Stereoselective synthesis of a 4-⍺-glucoside of valienamine and its X-ray structure in complex with Streptomyces coelicolor GlgE1-V279S.

Anshupriya Si, Thilina D Jayasinghe, Radhika Thanvi, Sunayana Kapil, Donald R Ronning, Steven J Sucheck

Erratum issuedOpen access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. TargetingACS infectious diseases · 2024
    Article
  2. Article
  3. Synthesis of CFrontiers in chemistry · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Anshupriya Si *Department of Chemistry and Biochemistry, University of Toledo, Toledo, OH, 43606, USA.
Thilina D Jayasinghe *Department of Pharmaceutical Sciences, University of Nebraska Medical Center, Omaha, NE, 68198, USA.
Radhika ThanviDepartment of Chemistry and Biochemistry, University of Toledo, Toledo, OH, 43606, USA.
Sunayana KapilMerck through ExecuPharm, Rahway, NJ, 07065, USA.
Donald R RonningDepartment of Pharmaceutical Sciences, University of Nebraska Medical Center, Omaha, NE, 68198, USA. don.ronning@unmc.edu.
Steven J SucheckDepartment of Chemistry and Biochemistry, University of Toledo, Toledo, OH, 43606, USA. steve.sucheck@utoledo.edu.
University of Toledo · USUniversity of Nebraska Medical Center · USMerck & Co., Inc., Rahway, NJ, USA (United States) · US

Funding

UNMC/EPPLEY CANCER CENTER SUPPORT GRANTP30CA036727 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI Joann B. Sweasy · 1985 to 2026
$55.0M
Understanding trehalose synthesis and utilization in mycobacteriaR01AI105084 · NIAID · UNIVERSITY OF TOLEDO · PI RONNING, DONALD R, SUCHECK, STEVEN · 2013 to 2022
$3.7M
NCI NIH HHS P30 CA036727NIAID NIH HHS R01 AI105084
6 · The paper itself

Abstract

Glycoside hydrolases (GH) are a large family of hydrolytic enzymes found in all domains of life. As such, they control a plethora of normal and pathogenic biological functions. Thus, understanding selective inhibition of GH enzymes at the atomic level can lead to the identification of new classes of therapeutics. In these studies, we identified a 4-⍺-glucoside of valienamine (8) as an inhibitor of Streptomyces coelicolor (Sco) GlgE1-V279S which belongs to the GH13 Carbohydrate Active EnZyme family. The results obtained from the dose-response experiments show that 8 at a concentration of 1000 µM reduced the enzyme activity of Sco GlgE1-V279S by 65%. The synthetic route to 8 and a closely related 4-⍺-glucoside of validamine (7) was achieved starting from readily available D-maltose. A key step in the synthesis was a chelation-controlled addition of vinylmagnesium bromide to a maltose-derived enone intermediate. X-ray structures of both 7 and 8 in complex with Sco GlgE1-V279S were solved to resolutions of 1.75 and 1.83 Å, respectively. Structural analysis revealed the valienamine derivative 8 binds the enzyme in an E

Indexed as

Amino AcidsAmino Acid SubstitutionBacterial ProteinsCarbohydrate ConformationCatalytic DomainCrystallography, X-RayCyclohexenesGlucosidesGlycoside Hydrolase InhibitorsGlycoside HydrolasesHexosaminesMaltoseModels, MolecularMutation, MissenseNuclear Magnetic Resonance, BiomolecularPoint MutationAmino AcidsBacterial ProteinsCyclohexenesGlucosidesGlycoside Hydrolase InhibitorsGlycoside HydrolasesHexosaminesMaltosevalienamine

Identifiers

PMID34183716
PMCPMC8238978
OpenAlexW3173201479

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.