Evidence map›Paper›PMID 34179855›Full record

ArticleIntelligence-based medicine2021

A critical analysis of COVID-19 research literature: Text mining approach.

Ferhat D Zengul, Ayse G Zengul, Michael J Mugavero, Nurettin Oner, Bunyamin Ozaydin, Dursun Delen, James H Willig, Kierstin C Kennedy, James Cimino

Abstract read
In one paragraph

Article in Intelligence-based medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Observational
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ferhat D ZengulDepartment of Health Services Administration, The University of Alabama at Birmingham, USA.
Ayse G ZengulDepartment of Nutrition, The University of Alabama at Birmingham, USA.
Michael J MugaveroDepartment of Medicine, Division of Infectious Diseases, The University of Alabama at Birmingham, USA.
Nurettin OnerDepartment of Health Services Administration, The University of Alabama at Birmingham, USA.
Bunyamin OzaydinDepartment of Health Services Administration, The University of Alabama at Birmingham, USA.
Dursun DelenDepartment of Management Science, School of Business, Ibn Haldun University, Istanbul, Turkey.
James H WilligDepartment of Medicine, Division of Infectious Diseases, The University of Alabama at Birmingham, USA.
Kierstin C KennedyUAB Hospital Medicine, University of Alabama at Birmingham, USA.
James CiminoDepartment of Medicine, The University of Alabama at Birmingham, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveAmong the stakeholders of COVID-19 research, clinicians particularly experience difficulty keeping up with the deluge of SARS-CoV-2 literature while performing their much needed clinical duties. By revealing major topics, this study proposes a text-mining approach as an alternative to navigating large volumes of COVID-19 literature. MATERIALS AND

methodsWe obtained 85,268 references from the NIH COVID-19 Portfolio as of November 21. After the exclusion based on inadequate abstracts, 65,262 articles remained in the final corpus. We utilized natural language processing to curate and generate the term list. We applied topic modeling analyses and multiple correspondence analyses to reveal the major topics and the associations among topics, journal countries, and publication sources.

resultsIn our text mining analyses of NIH's COVID-19 Portfolio, we discovered two sets of eleven major research topics by analyzing abstracts and titles of the articles separately. The eleven major areas of COVID-19 research based on abstracts included the following topics: 1) Public Health, 2) Patient Care & Outcomes, 3) Epidemiologic Modeling, 4) Diagnosis and Complications, 5) Mechanism of Disease, 6) Health System Response, 7) Pandemic Control, 8) Protection/Prevention, 9) Mental/Behavioral Health, 10) Detection/Testing, 11) Treatment Options. Further analyses revealed that five (2,3,4,5, and 9) of the eleven abstract-based topics showed a significant correlation (ranked from moderate to weak) with title-based topics.

conclusionBy offering up the more dynamic, scalable, and responsive categorization of published literature, our study provides valuable insights to the stakeholders of COVID-19 research, particularly clinicians.

Indexed as

COVID-19Natural language processingSARS COV-2Text miningTopic modeling

Identifiers

PMID34179855
PMCPMC8214804

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.