Evidence map›Paper›PMID 34178558›Full record

ArticleIEEE access : practical innovations, open solutions2021

Deep Metric Learning for Cervical Image Classification.

Anabik Pal, Zhiyun Xue, Brian Befano, Ana Cecilia Rodriguez, L Rodney Long, Mark Schiffman, Sameer Antani

Open access · goldAbstract read
In one paragraph

Article in IEEE access : practical innovations, open solutions, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Deep Cervix Model Development from Heterogeneous and Partially Labeled Image Datasets.Frontiers of ICT in Healthcare : proceedings of EAIT 2022. International Conference on Emerging Applications of Information Technology (7th : 2022 : Kolkata, India ; Online) · 2023
    Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Oral Cavity Anatomical Site Image Classification and Analysis.Proceedings of SPIE--the International Society for Optical Engineering
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Anabik PalNational Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.ORCID 0000-0001-5737-9056
Zhiyun XueNational Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.ORCID 0000-0003-0644-385X
Brian BefanoInformation Management Services, Calverton, MD 20705, USA.
Ana Cecilia RodriguezNational Cancer Institute, National Institutes of Health, Rockville, MD 20850, USA.
L Rodney LongNational Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
Mark SchiffmanNational Cancer Institute, National Institutes of Health, Rockville, MD 20850, USA.
Sameer AntaniNational Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.ORCID 0000-0002-0040-1387
National Institutes of Health · USInformation Management Services · US

Funding

Developing Data-Driven Cancer ResearchersT32CA009168 · NCI · UNIVERSITY OF WASHINGTON · PI STEPHEN M SCHWARTZ, MICHAEL Chiao-An WU · 1985 to 2026
$10.1M
Intramural NIH HHS Z99 LM999999NCI NIH HHS T32 CA009168
6 · The paper itself

Abstract

Cervical cancer is caused by the persistent infection of certain types of the Human Papillomavirus (HPV) and is a leading cause of female mortality particularly in low and middle-income countries (LMIC). Visual inspection of the cervix with acetic acid (VIA) is a commonly used technique in cervical screening. While this technique is inexpensive, clinical assessment is highly subjective, and relatively poor reproducibility has been reported. A deep learning-based algorithm for automatic visual evaluation (AVE) of aceto-whitened cervical images was shown to be effective in detecting confirmed precancer (i.e. direct precursor to invasive cervical cancer). The images were selected from a large longitudinal study conducted by the National Cancer Institute in the Guanacaste province of Costa Rica. The training of AVE used annotation for cervix boundary, and the data scarcity challenge was dealt with manually optimized data augmentation. In contrast, we present a novel approach for cervical precancer detection using a deep metric learning-based (DML) framework which does not incorporate any effort for cervix boundary marking. The DML is an advanced learning strategy that can deal with data scarcity and bias training due to class imbalance data in a better way. Three different widely-used state-of-the-art DML techniques are evaluated- (a) Contrastive loss minimization, (b) N-pair embedding loss minimization, and, (c) Batch-hard loss minimization. Three popular Deep Convolutional Neural Networks (ResNet-50, MobileNet, NasNet) are configured for training with DML to produce class-separated (i.e. linearly separable) image feature descriptors. Finally, a K-Nearest Neighbor (KNN) classifier is trained with the extracted deep features. Both the feature quality and classification performance are quantitatively evaluated on the same data set as used in AVE. It shows that, unlike AVE, without using any data augmentation, the best model produced from our research improves specificity in disease detection without compromising sensitivity. The present research thus paves the way for new research directions for the related field.

Indexed as

Automated cervical visual examinationcervical cancerdeep metric learningsiamese network

Identifiers

PMID34178558
PMCPMC8224396
OpenAlexW3148004426

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.