Evidence map›Paper›PMID 34174811›Full record

ArticleBMC genomics2021

Buffalo sperm surface proteome profiling reveals an intricate relationship between innate immunity and reproduction.

Vipul Batra, Vanya Bhushan, Syed Azmal Ali, Parul Sarwalia, Ankit Pal, Seema Karanwal, Subhash Solanki, Arumugam Kumaresan, Rakesh Kumar, Tirtha Kumar Datta

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Vipul BatraAnimal Genomics Lab., Animal Biotechnology Centre, National Dairy Research Institute, Karnal, India.
Vanya Bhushan *Proteomics and Molecular Biology Lab, Animal Biotechnology Centre, National Dairy Research Institute, Karnal, India.
Syed Azmal Ali *Proteomics and Molecular Biology Lab, Animal Biotechnology Centre, National Dairy Research Institute, Karnal, India.
Parul SarwaliaAnimal Genomics Lab., Animal Biotechnology Centre, National Dairy Research Institute, Karnal, India.
Ankit PalAnimal Genomics Lab., Animal Biotechnology Centre, National Dairy Research Institute, Karnal, India.
Seema KaranwalAnimal Genomics Lab., Animal Biotechnology Centre, National Dairy Research Institute, Karnal, India.
Subhash SolankiAnimal Genomics Lab., Animal Biotechnology Centre, National Dairy Research Institute, Karnal, India.
Arumugam KumaresanTheriogenology Lab, SRS of National Dairy Research Institute, Bengaluru, India.
Rakesh KumarAnimal Genomics Lab., Animal Biotechnology Centre, National Dairy Research Institute, Karnal, India.
Tirtha Kumar DattaAnimal Genomics Lab., Animal Biotechnology Centre, National Dairy Research Institute, Karnal, India. tirtha.datta@icar.gov.in.
National Dairy Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLow conception rate (CR) despite insemination with morphologically normal spermatozoa is a common reproductive restraint that limits buffalo productivity. This accounts for a significant loss to the farmers and the dairy industry, especially in agriculture-based economies. The immune-related proteins on the sperm surface are known to regulate fertility by assisting the spermatozoa in their survival and performance in the female reproductive tract (FRT). Regardless of their importance, very few studies have specifically catalogued the buffalo sperm surface proteome. The study was designed to determine the identity of sperm surface proteins and to ascertain if the epididymal expressed beta-defensins (BDs), implicated in male fertility, are translated and applied onto buffalo sperm surface along with other immune-related proteins.

resultsThe raw mass spectra data searched against an in-house generated proteome database from UniProt using Comet search engine identified more than 300 proteins on the ejaculated buffalo sperm surface which were bound either by non-covalent (ionic) interactions or by a glycosylphosphatidylinositol (GPI) anchor. The singular enrichment analysis (SEA) revealed that most of these proteins were extracellular with varied binding activities and were involved in either immune or reproductive processes. Flow cytometry using six FITC-labelled lectins confirmed the prediction of glycosylation of these proteins. Several beta-defensins (BDs), the anti-microbial peptides including the BuBD-129 and 126 were also identified amongst other buffalo sperm surface proteins. The presence of these proteins was subsequently confirmed by RT-qPCR, immunofluorescence and in vitro fertilization (IVF) experiments.

conclusionsThe surface of the buffalo spermatozoa is heavily glycosylated because of the epididymal secreted (glyco) proteins like BDs and the GPI-anchored proteins (GPI-APs). The glycosylation pattern of buffalo sperm-surface, however, could be perturbed in the presence of elevated salt concentration or incubation with PI-PLC. The identification of numerous BDs on the sperm surface strengthens our hypothesis that the buffalo BDs (BuBDs) assist the spermatozoa either in their survival or in performance in the FRT. Our results suggest that BuBD-129 is a sperm-surface BD that could have a role in buffalo sperm function. Further studies elucidating its exact physiological function are required to better understand its role in the regulation of male fertility.

Indexed as

BuffaloesProteomeAnimalsEpididymisFemaleImmunity, InnateMaleReproductionSpermatozoaProteomeBeta-defensinsBuffaloEpididymisGlycosylationSperm

Identifiers

PMID34174811
PMCPMC8235841
OpenAlexW3120335551

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.