Evidence map›Paper›PMID 34173119›Full record

ArticleNeurochemical research2021

Cloning and Functional Analysis of Rat Tweety-Homolog 1 Gene Promoter.

Malgorzata Gorniak-Walas, Karolina Nizinska, Katarzyna Lukasiuk

Open access · hybridAbstract read
In one paragraph

Article in Neurochemical research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Malgorzata Gorniak-WalasLaboratory of Epileptogenesis, Nencki Institute of Experimental Biology, Polish Academy of Sciences, 3 Pasteur Street, 02-093, Warsaw, Poland.ORCID http://orcid.org/0000-0003-1236-8622
Karolina NizinskaLaboratory of Epileptogenesis, Nencki Institute of Experimental Biology, Polish Academy of Sciences, 3 Pasteur Street, 02-093, Warsaw, Poland.ORCID http://orcid.org/0000-0002-4215-5313
Katarzyna LukasiukLaboratory of Epileptogenesis, Nencki Institute of Experimental Biology, Polish Academy of Sciences, 3 Pasteur Street, 02-093, Warsaw, Poland. k.lukasiuk@nencki.edu.pl.ORCID http://orcid.org/0000-0002-1582-0920
Instytut Biologii Doświadczalnej im. Marcelego Nenckiego · PL

Funding

Narodowe Centrum Nauki 2011/03/B/NZ4/00302Narodowe Centrum Nauki 2015/19/N/NZ3/03268
6 · The paper itself

Abstract

Tweety-homolog 1 protein (Ttyh1) is abundantly expressed in neurons in the healthy brain, and its expression is induced under pathological conditions. In hippocampal neurons in vitro, Ttyh1 was implicated in the regulation of primary neuron morphology. However, the mechanisms that underlie transcriptional regulation of the Ttyh1 gene in neurons remain elusive. The present study sought to identify the promoter of the Ttyh1 gene and functionally characterize cis-regulatory elements that are potentially involved in the transcriptional regulation of Ttyh1 expression in rat dissociated hippocampal neurons in vitro. We cloned a 592 bp rat Ttyh1 promoter sequence and designed deletion constructs of the transcription factors specificity protein 1 (Sp1), E2F transcription factor 3 (E2f3), and achaete-scute homolog 1 (Ascl1) that were fused upstream of a luciferase reporter gene in pGL4.10[luc2]. The luciferase reporter gene assay showed the possible involvement of Ascl1, Sp1, and responsive cis-regulatory elements in Ttyh1 expression. These findings provide novel information about Ttyh1 gene regulation in neurons.

Indexed as

AnimalsBase SequenceBasic Helix-Loop-Helix ProteinsE2F3 Transcription FactorEmbryo, MammalianFemaleGene Expression RegulationMembrane ProteinsMiceNerve Tissue ProteinsPregnancyPromoter Regions, GeneticRatsRats, WistarSequence AlignmentSp1 Transcription FactorAscl1 protein, ratBasic Helix-Loop-Helix ProteinsE2F3 Transcription FactorMembrane ProteinsNerve Tissue ProteinsSp1 Transcription FactorTtyh1 protein, ratDual luciferase assayPromoterTranscription factorsTtyh1

Identifiers

PMID34173119
PMCPMC8302521
OpenAlexW3173873752

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.