Evidence map›Paper›PMID 34172582›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Ion-dependent protein-surface interactions from intrinsic solvent response.

Jesse L Prelesnik, Robert G Alberstein, Shuai Zhang, Harley Pyles, David Baker, Jim Pfaendtner, James J De Yoreo, F Akif Tezcan, Richard C Remsing, Christopher J Mundy

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jesse L PrelesnikDepartment of Chemistry, University of Washington, Seattle, WA 98195.ORCID 0000-0002-5089-5215
Robert G AlbersteinDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093.ORCID 0000-0002-6655-8811
Shuai ZhangPhysical Sciences Division, Physical and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA 99354.ORCID 0000-0003-0170-6470
Harley PylesDepartment of Biochemistry, University of Washington, Seattle, WA 98195.
David BakerDepartment of Biochemistry, University of Washington, Seattle, WA 98195.ORCID 0000-0001-7896-6217
Jim PfaendtnerDepartment of Chemistry, University of Washington, Seattle, WA 98195.ORCID 0000-0001-6727-2957
James J De YoreoPhysical Sciences Division, Physical and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA 99354.
F Akif TezcanDepartment of Chemistry and Biochemistry, University of California, San Diego, La Jolla, CA 92093; chris.mundy@pnnl.gov rick.remsing@rutgers.edu tezcan@ucsd.edu.ORCID 0000-0002-4733-6500
Richard C RemsingDepartment of Chemistry and Chemical Biology, Rutgers University, Piscataway, NJ 08854; chris.mundy@pnnl.gov rick.remsing@rutgers.edu tezcan@ucsd.edu.
Christopher J MundyDepartment of Chemical Engineering, University of Washington, Seattle, WA 98195; chris.mundy@pnnl.gov rick.remsing@rutgers.edu tezcan@ucsd.edu.ORCID 0000-0003-1378-5241

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phyllosilicate mineral muscovite mica is widely used as a surface template for the patterning of macromolecules, yet a molecular understanding of its surface chemistry under varying solution conditions, required to predict and control the self-assembly of adsorbed species, is lacking. We utilize all-atom molecular dynamics simulations in conjunction with an electrostatic analysis based in local molecular field theory that affords a clean separation of long-range and short-range electrostatics. Using water polarization response as a measure of the electric fields that arise from patterned, surface-bound ions that direct the adsorption of charged macromolecules, we apply a Landau theory of forces induced by asymmetrically polarized surfaces to compute protein-surface interactions for two muscovite-binding proteins (DHR10-mica6 and

Indexed as

Aluminum SilicatesIonsMicroscopy, Atomic ForceProbabilityProteinsSolventsSurface PropertiesWaterAluminum SilicatesIonsmicamuscoviteProteinsSolventsWaterelectrostaticsLandau theorysoft mattersolution assemblyspecific ion effects

Identifiers

PMID34172582
PMCPMC8255788

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.