Evidence map›Paper›PMID 34170419›Full record

ArticleAntonie van Leeuwenhoek2021

The impact of transcription factors Znf1, Sip4, Adr1, Tup1, and Hap4 on xylose alcoholic fermentation in the engineered yeast Saccharomyces cerevisiae.

Ljubov Dzanaeva, Barbara Kruk, Justyna Ruchala, Andriy Sibirny, Kostyantyn Dmytruk

Abstract read
PubMed Publisher
In one paragraph

Article in Antonie van Leeuwenhoek, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Xylitol bioproduction by Candida tropicalis: effects of glucose/xylose ratio and pH on fermentation and gene expression.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  4. Engineering ofEngineering microbiology · 2023
    Review
  5. Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Ljubov DzanaevaDepartment of Molecular Genetics and Biotechnology, Institute of Cell Biology, NAS of Ukraine, Drahomanova Street, 14/16, Lviv, 79005, Ukraine.
Barbara KrukDepartment of Biotechnology and Microbiology, University of Rzeszow, Cwiklinskiej 2, 35-601, Rzeszow , Poland.
Justyna RuchalaDepartment of Biotechnology and Microbiology, University of Rzeszow, Cwiklinskiej 2, 35-601, Rzeszow , Poland.
Andriy SibirnyDepartment of Molecular Genetics and Biotechnology, Institute of Cell Biology, NAS of Ukraine, Drahomanova Street, 14/16, Lviv, 79005, Ukraine.
Kostyantyn DmytrukDepartment of Molecular Genetics and Biotechnology, Institute of Cell Biology, NAS of Ukraine, Drahomanova Street, 14/16, Lviv, 79005, Ukraine. dmytruk77@gmail.com.ORCID http://orcid.org/0000-0003-3661-8913
Institute of Cell Biology · UAUniversity of Rzeszów · PL

Funding

National Academy of Sciences of Ukraine Grants 2-21 and 17-21Polish National Science Center UMO-2016/21/B/NZ1/00280 and DEC-2020/37/B/NZ1/02232
6 · The paper itself

Abstract

Lignocellulosic biomass is an attractive sustainable platform for fuel ethanol production. Xylose is a second after glucose most abounded sugar in lignocellulosic hydrolysates. Effective conversion of xylose to ethanol is one of key prerequisite for the development of an efficient conversion of biomass to ethanol. Engineered Saccharomyces cerevisiae strains are able to xylose fermentation. However, the yield and productivities of xylose fermentation remains lower in comparison with glucose fermentation. In this work, we studied impact of transcription factors Znf1, Sip4, Adr1, Tup1, and Hap4 on xylose catabolism. We have isolated znf1Δ, adr1Δ, tup1Δ and hap4Δ mutants, and strains overexpressing SIP4, ADR1 and HAP4 genes on the background of xylose-fermenting strain of S. cerevisiae aiming to explore involvement of these transcription factors in regulation of xylose growth and fermentation. It was shown that hap4Δ reveal 1.8-fold increase of ethanol production from xylose as compared to that of parental strain. The hap4Δ mutant accumulates 10.38 g l

Indexed as

Saccharomyces cerevisiae ProteinsXyloseDNA-Binding ProteinsFermentationGlucoseNuclear ProteinsRepressor ProteinsSaccharomyces cerevisiaeTranscription FactorsDNA-Binding ProteinsGlucoseNuclear ProteinsRepressor ProteinsSaccharomyces cerevisiae ProteinsTranscription FactorsTUP1 protein, S cerevisiaeXyloseZnf1 protein, S cerevisiaeAlcoholic fermentationS. cerevisiaeTranscription factorsXylose

Identifiers

PMID34170419
OpenAlexW3177273487

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.