Evidence map›Paper›PMID 34170092›Full record

ArticleJournal of veterinary science2021

Molecular detection and characterization of ovine herpesvirus-2 using heminested PCR in Pakistan.

Aayesha Riaz, Inga Dry, Robert Dalziel, Saif Ur Rehman, Muhammad Ali Shah, Hafiz Muhammad Naeem Akhtar, Arfan Yousaf, Ruqia Baig

Open access · goldAbstract read
In one paragraph

Article in Journal of veterinary science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Molecular detection of ovine gammaherpesvirus 2 in free ranging wild boars (Sus scrofa) from Southern Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  6. Viral Diseases in Water Buffalo (Animals : an open access journal from MDPI · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Aayesha RiazDepartment of Parasitology and Microbiology, Faculty of Veterinary and Animal Sciences, PMAS-Arid Agriculture University, Rawalpindi 46000, Pakistan. aayeshariaz@uaar.edu.pk.ORCID https://orcid.org/0000-0001-6411-5753
Inga DryThe Roslin Institute, University of Edinburgh, Easter Bush Campus, Midlothian, Scotland, EH25 9RG, UK.ORCID https://orcid.org/0000-0002-4593-8102
Robert DalzielThe Roslin Institute, University of Edinburgh, Easter Bush Campus, Midlothian, Scotland, EH25 9RG, UK.ORCID https://orcid.org/0000-0001-7680-4804
Saif Ur RehmanDepartment of Parasitology and Microbiology, Faculty of Veterinary and Animal Sciences, PMAS-Arid Agriculture University, Rawalpindi 46000, Pakistan.ORCID https://orcid.org/0000-0001-5139-8619
Muhammad Ali ShahDepartment of Parasitology and Microbiology, Faculty of Veterinary and Animal Sciences, PMAS-Arid Agriculture University, Rawalpindi 46000, Pakistan.ORCID https://orcid.org/0000-0002-6925-7512
Hafiz Muhammad Naeem AkhtarDepartment of Parasitology and Microbiology, Faculty of Veterinary and Animal Sciences, PMAS-Arid Agriculture University, Rawalpindi 46000, Pakistan.ORCID https://orcid.org/0000-0002-0975-9414
Arfan YousafDepartment of Clinical studies, Faculty of Veterinary and Animal Sciences, PMAS-Arid Agriculture University, Rawalpindi 46000, Pakistan.ORCID https://orcid.org/0000-0002-3438-6808
Ruqia BaigDepartment of Zoology, Faculty of Sciences, PMAS-Arid Agriculture University, Rawalpindi 46000, Pakistan.ORCID https://orcid.org/0000-0002-5605-7191
Pir Mehr Ali Shah Arid Agriculture University · PKRoslin Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/D/20002173Biotechnology and Biological Sciences Research Council BBS/E/D/20241864Higher Education Commission, Pakistan SRGP 620
6 · The paper itself

Abstract

backgroundMalignant catarrhal fever (MCF) is a highly fatal lymphoproliferative disease of cattle, deer, bison, water buffalo, and pigs caused by the gamma-herpesviruses alcelaphine herpesvirus-1 (AlHV-1) and ovine herpesvirus-2 (OvHV-2).

objectivesThis study aimed to determine the prevalence of OvHV-2 in sheep, goats, cattle, and buffalo in Rawalpindi and Islamabad, Pakistan, by applying molecular and phylogenetic methods.

methodsBlood samples were aspirated from sheep (n = 54), goat (n = 50), cattle (n = 46) and buffalo (n= 50) at a slaughterhouse and several farms. The samples were subjected to heminested polymerase chain reaction (PCR), followed by sequencing and phylogenetic analysis of the OvHV-2 POL gene and the OvHV-2 ORF75 tegument protein gene.

resultsThe highest percentage of MCF positive samples was in sheep (13%), whereas goat, cattle, and buffalo had lower positive percentages, 11%, 9%, and 6.5%, respectively. Four OvHV-2-positive PCR products obtained from sheep samples were sequenced. The sequences obtained were submitted to the NCBI GenBank database (MK852173 for the POL gene; MK840962, MK852171, and MK852172 for the ORF75 tegument protein gene). Phylogenetic analysis revealed a close similarity of study sequences with those of worldwide samples.

conclusionsThis study is the first cross-sectional study on the prevalence and molecular detection of OvHV-2 in apparently healthy cattle and buffalo that could be carrying OvHV-2 acquired from OvHV-2-positive sheep and goats. The results indicate that OvHV-2 is circulating in Pakistan. Further studies are needed to characterize OvHV-2 and elucidate further its prevalence.

Indexed as

AnimalsBuffaloesCattleCross-Sectional StudiesGammaherpesvirinaeGoatsHerpesviridae InfectionsLivestockPakistanPhylogenyPolymerase Chain ReactionPrevalenceSheepViral ProteinsViral ProteinsDNA Viruses, Nested Polymerase Chain Reaction, Ruminants, PakistanMalignant catarrhal fever

Identifiers

PMID34170092
PMCPMC8318789
OpenAlexW3172614987

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.