Evidence map›Paper›PMID 34168203›Full record

ArticleScientific reports2021

Deterministic and stochastic modelling of impacts from genomic selection and phenomics on genetic gain for perennial ryegrass dry matter yield.

M Z Z Jahufer, Sai Krishna Arojju, Marty J Faville, Kioumars Ghamkhar, Dongwen Luo, Vivi Arief, Wen-Hsi Yang, Mingzhu Sun, Ian H DeLacy, Andrew G Griffiths and 7 more

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Estimation of ryegrass (Frontiers in plant science · 2025
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

M Z Z JahuferGrasslands Research Centre, AgResearch Ltd, Palmerston North, 4442, New Zealand. zulfi.jahufer@agresearch.co.nz.
Sai Krishna ArojjuGrasslands Research Centre, AgResearch Ltd, Palmerston North, 4442, New Zealand.
Marty J FavilleGrasslands Research Centre, AgResearch Ltd, Palmerston North, 4442, New Zealand.
Kioumars GhamkharGrasslands Research Centre, AgResearch Ltd, Palmerston North, 4442, New Zealand.
Dongwen LuoGrasslands Research Centre, AgResearch Ltd, Palmerston North, 4442, New Zealand.
Vivi AriefSchool of Agriculture and Food Sciences, Faculty of Science, The University of Queensland, Brisbane, QLD, 4072, Australia.
Wen-Hsi YangSchool of Agriculture and Food Sciences, Faculty of Science, The University of Queensland, Brisbane, QLD, 4072, Australia.
Mingzhu SunThe Centre for Complex Analytics and Visualisation, AutoStat Institute, Melbourne, VIC, 3000, Australia.
Ian H DeLacySchool of Agriculture and Food Sciences, Faculty of Science, The University of Queensland, Brisbane, QLD, 4072, Australia.
Andrew G GriffithsGrasslands Research Centre, AgResearch Ltd, Palmerston North, 4442, New Zealand.
Colin EadyBarenbrug NZ Ltd, Christchurch, 7571, New Zealand.
Will ClaytonBarenbrug NZ Ltd, Christchurch, 7571, New Zealand.
Alan V StewartKimihia Research Centre, PGG Wrightson Seeds Ltd, Christchurch, 7676, New Zealand.
Richard M GeorgeKimihia Research Centre, PGG Wrightson Seeds Ltd, Christchurch, 7676, New Zealand.
Valerio Hoyos-VillegasDepartment of Plant Science, McGill University, Montreal, QC, H3A 0G4, Canada.
Kaye E BasfordSchool of Agriculture and Food Sciences, Faculty of Science, The University of Queensland, Brisbane, QLD, 4072, Australia.
Brent BarrettGrasslands Research Centre, AgResearch Ltd, Palmerston North, 4442, New Zealand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Increasing the efficiency of current forage breeding programs through adoption of new technologies, such as genomic selection (GS) and phenomics (Ph), is challenging without proof of concept demonstrating cost effective genetic gain (∆G). This paper uses decision support software DeltaGen (tactical tool) and QU-GENE (strategic tool), to model and assess relative efficiency of five breeding methods. The effect on ∆G and cost ($) of integrating GS and Ph into an among half-sib (HS) family phenotypic selection breeding strategy was investigated. Deterministic and stochastic modelling were conducted using mock data sets of 200 and 1000 perennial ryegrass HS families using year-by-season-by-location dry matter (DM) yield data and in silico generated data, respectively. Results demonstrated short (deterministic)- and long-term (stochastic) impacts of breeding strategy and integration of key technologies, GS and Ph, on ∆G. These technologies offer substantial improvements in the rate of ∆G, and in some cases improved cost-efficiency. Applying 1% within HS family GS, predicted a 6.35 and 8.10% ∆G per cycle for DM yield from the 200 HS and 1000 HS, respectively. The application of GS in both among and within HS selection provided a significant boost to total annual ∆G, even at low GS accuracy r

Indexed as

Genetic Association StudiesLoliumModels, StatisticalPlant BreedingQuantitative Trait, HeritableSelection, GeneticStochastic Processes

Identifiers

PMID34168203
PMCPMC8225875

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.