Evidence map›Paper›PMID 34168170›Full record

ArticleScientific reports2021

Alterations in gut microbiota linked to provenance, sex, and chronic wasting disease in white-tailed deer (Odocoileus virginianus).

David Minich, Christopher Madden, Morgan V Evans, Gregory A Ballash, Daniel J Barr, Keith P Poulsen, Patricia M Dennis, Vanessa L Hale

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

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  15. Captivity Shifts Gut Microbiota Communities in White-Lipped Deer (Animals : an open access journal from MDPI · 2022
    Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

David MinichThe Ohio State University College of Veterinary Medicine, Columbus, OH, USA.
Christopher MaddenVeterinary Preventive Medicine Department, The Ohio State University College of Veterinary Medicine, 1900 Coffey Rd., Columbus, OH, 43210, USA.
Morgan V EvansVeterinary Preventive Medicine Department, The Ohio State University College of Veterinary Medicine, 1900 Coffey Rd., Columbus, OH, 43210, USA.
Gregory A BallashThe Ohio State University College of Veterinary Medicine, Columbus, OH, USA.
Daniel J BarrWisconsin Veterinary Diagnostic Laboratory, University of Wisconsin-Madison, Madison, WI, USA.
Keith P PoulsenWisconsin Veterinary Diagnostic Laboratory, University of Wisconsin-Madison, Madison, WI, USA.
Patricia M DennisVeterinary Preventive Medicine Department, The Ohio State University College of Veterinary Medicine, 1900 Coffey Rd., Columbus, OH, 43210, USA.
Vanessa L HaleVeterinary Preventive Medicine Department, The Ohio State University College of Veterinary Medicine, 1900 Coffey Rd., Columbus, OH, 43210, USA. hale.502@osu.edu.
The Ohio State University · USUniversity of Wisconsin–Madison · US

Funding

Short Trem Research Training for Veterinary StudentsT35OD010977 · OD · OHIO STATE UNIVERSITY · PI Christine A Petersen · 2012 to 2026
$1.1M
NIH HHS T35 OD010977
6 · The paper itself

Abstract

Chronic wasting disease (CWD) is a fatal, contagious, neurodegenerative prion disease affecting both free-ranging and captive cervid species. CWD is spread via direct or indirect contact or oral ingestion of prions. In the gastrointestinal tract, prions enter the body through microfold cells (M-cells), and the abundance of these cells can be influenced by the gut microbiota. To explore potential links between the gut microbiota and CWD, we collected fecal samples from farmed and free-ranging white-tailed deer (Odocoileus virginianus) around the Midwest, USA. Farmed deer originated from farms that were depopulated due to CWD. Free-ranging deer were sampled during annual deer harvests. All farmed deer were tested for CWD via ELISA and IHC, and we used 16S rRNA gene sequencing to characterize the gut microbiota. We report significant differences in gut microbiota by provenance (Farm 1, Farm 2, Free-ranging), sex, and CWD status. CWD-positive deer from Farm 1 and 2 had increased abundances of Akkermansia, Lachnospireacea UCG-010, and RF39 taxa. Overall, differences by provenance and sex appear to be driven by diet, while differences by CWD status may be linked to CWD pathogenesis.

Indexed as

AnimalsDeerEnzyme-Linked Immunosorbent AssayFemaleGastrointestinal MicrobiomeMalePrionsRNA, Ribosomal, 16SWasting Disease, ChronicPrionsRNA, Ribosomal, 16S

Identifiers

PMID34168170
PMCPMC8225879
OpenAlexW3177094535

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.