Evidence map›Paper›PMID 34163919›Full record

ArticleChemical science2020

A β-hairpin epitope as novel structural requirement for protein arginine rhamnosylation.

Liubov Yakovlieva, Thomas M Wood, Johan Kemmink, Ioli Kotsogianni, Franziska Koller, Jürgen Lassak, Nathaniel I Martin, Marthe T C Walvoort

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Liubov YakovlievaChemical Biology Group, Stratingh Institute for Chemistry, University of Groningen Groningen The Netherlands m.t.c.walvoort@rug.nl.ORCID https://orcid.org/0000-0003-2061-4352
Thomas M WoodBiological Chemistry Group, Institute of Biology Leiden, Leiden University Leiden The Netherlands n.i.martin@biology.leidenuniv.nl.ORCID https://orcid.org/0000-0001-7270-147X
Johan KemminkChemical Biology Group, Stratingh Institute for Chemistry, University of Groningen Groningen The Netherlands m.t.c.walvoort@rug.nl.
Ioli KotsogianniBiological Chemistry Group, Institute of Biology Leiden, Leiden University Leiden The Netherlands n.i.martin@biology.leidenuniv.nl.ORCID https://orcid.org/0000-0003-0078-0206
Franziska KollerDepartment of Biology I, Microbiology, Ludwig-Maximilians-Universität München Planegg/Martinsried Germany.ORCID https://orcid.org/0000-0003-2003-7129
Jürgen LassakDepartment of Biology I, Microbiology, Ludwig-Maximilians-Universität München Planegg/Martinsried Germany.ORCID https://orcid.org/0000-0003-3936-3389
Nathaniel I MartinBiological Chemistry Group, Institute of Biology Leiden, Leiden University Leiden The Netherlands n.i.martin@biology.leidenuniv.nl.ORCID https://orcid.org/0000-0001-8246-3006
Marthe T C WalvoortChemical Biology Group, Stratingh Institute for Chemistry, University of Groningen Groningen The Netherlands m.t.c.walvoort@rug.nl.ORCID https://orcid.org/0000-0003-1101-2659
Leiden University · NLUniversity of Groningen · NLLudwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For canonical asparagine glycosylation, the primary amino acid sequence that directs glycosylation at specific asparagine residues is well-established. Here we reveal that a recently discovered bacterial enzyme EarP, that transfers rhamnose to a specific arginine residue in its acceptor protein EF-P, specifically recognizes a β-hairpin loop. Notably, while the

Identifiers

PMID34163919
PMCPMC8179230
OpenAlexW3111641958

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.