Evidence map›Paper›PMID 34163496›Full record

ArticleFrontiers in plant science2021

A User Manual to Measure Gas Diffusion Kinetics in Plants: Pneumatron Construction, Operation, and Data Analysis.

Christophe L Trabi, Luciano Pereira, Xinyi Guan, Marcela T Miranda, Paulo R L Bittencourt, Rafael S Oliveira, Rafael V Ribeiro, Steven Jansen

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Christophe L TrabiInstitute of Systematic Botany and Ecology, Ulm University, Ulm, Germany.
Luciano PereiraInstitute of Systematic Botany and Ecology, Ulm University, Ulm, Germany.
Xinyi GuanInstitute of Systematic Botany and Ecology, Ulm University, Ulm, Germany.
Marcela T MirandaCenter R&D in Ecophysiology and Biophysics, Agronomic Institute (IAC), Campinas, Brazil.
Paulo R L BittencourtCollege of Life and Environmental Sciences, University of Exeter, Exeter, United Kingdom.
Rafael S OliveiraDepartment of Plant Biology, Institute of Biology, University of Campinas (UNICAMP), Campinas, Brazil.
Rafael V RibeiroDepartment of Plant Biology, Institute of Biology, University of Campinas (UNICAMP), Campinas, Brazil.
Steven JansenInstitute of Systematic Botany and Ecology, Ulm University, Ulm, Germany.
Universität Ulm · DEAgronomical Institute of Campinas · BRUniversidade Estadual de Campinas (UNICAMP) · BRUniversity of Exeter · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Pneumatron device measures gas diffusion kinetics in the xylem of plants. The device provides an easy, low-cost, and powerful tool for research on plant water relations and gas exchange. Here, we describe in detail how to construct and operate this device to estimate embolism resistance of angiosperm xylem, and how to analyse pneumatic data. Simple and more elaborated ways of constructing a Pneumatron are shown, either using wires, a breadboard, or a printed circuit board. The instrument is based on an open-source hardware and software system, which allows users to operate it in an automated or semi-automated way. A step-by-step manual and a troubleshooting section are provided. An excel spreadsheet and an R-script are also presented for fast and easy data analysis. This manual aims at helping users to avoid common mistakes, such as unstable measurements of the minimum and maximum amount of gas discharged from xylem tissue, which has major consequences for estimating embolism resistance. Major advantages of the Pneumatron device include its automated and accurate measurements of gas diffusion rates, including highly precise measurements of the gas volume in intact, embolised conduits. It is currently unclear if the method can also be applied to woody monocots, gymnosperm species that possess torus-margo pit membranes, or to herbaceous species.

Indexed as

gas diffusiongas flowplant hydraulicsplant pneumaticsplant water relationsvulnerability to embolismxylem

Identifiers

PMID34163496
PMCPMC8216216
OpenAlexW3168993722

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.