Evidence map›Paper›PMID 34162980›Full record

ArticleNPJ precision oncology2021

A computational method for prioritizing targeted therapies in precision oncology: performance analysis in the SHIVA01 trial.

Istvan Petak, Maud Kamal, Anna Dirner, Ivan Bieche, Robert Doczi, Odette Mariani, Peter Filotas, Anne Salomon, Barbara Vodicska, Vincent Servois and 14 more

Open access · goldAbstract read
In one paragraph

Article in NPJ precision oncology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

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  14. Adaptive Cancer Therapy in the Age of Generative Artificial Intelligence.Cancer control : journal of the Moffitt Cancer Center
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 4 institutions in 3 countries.

Istvan Petak *Department of Pharmacology and Pharmacotherapy, Semmelweis University, Budapest, Hungary. istvan.petak.dr@gmail.com.ORCID http://orcid.org/0000-0003-0422-9286
Maud KamalDepartment of Drug Development and Innovation (D3i), Institute Curie, Paris & Saint-Cloud, France.
Anna DirnerOncompass Medicine, Budapest, Hungary.
Ivan BiechePharmacogenomics unit, Institut Curie, Paris, France.
Robert DocziOncompass Medicine, Budapest, Hungary.
Odette MarianiDepartment of Biopathology, Institut Curie, Paris, France.
Peter FilotasOncompass Medicine, Budapest, Hungary.
Anne SalomonDepartment of Biopathology, Institut Curie, Paris, France.ORCID http://orcid.org/0000-0001-5754-5771
Barbara VodicskaOncompass Medicine, Budapest, Hungary.ORCID http://orcid.org/0000-0003-1191-234X
Vincent ServoisDepartment of Radiology, Institut Curie, Paris, France.ORCID http://orcid.org/0000-0002-8378-8432
Edit VarkondiOncompass Medicine, Budapest, Hungary.
David GentienTranslational Research Department, Institut Curie, Paris, France.
Dora TihanyiOncompass Medicine, Budapest, Hungary.
Patricia TrescaDepartment of Drug Development and Innovation (D3i), Institute Curie, Paris & Saint-Cloud, France.
Dora LakatosOncompass Medicine, Budapest, Hungary.
Nicolas ServantINSERM U900 Research Unit, Paris & Saint-Cloud, France.ORCID http://orcid.org/0000-0003-1678-7410
Julia DeriOncompass Medicine, Budapest, Hungary.
Pauline du RusquecDepartment of Drug Development and Innovation (D3i), Institute Curie, Paris & Saint-Cloud, France.ORCID http://orcid.org/0000-0001-5803-4850
Csilla HegedusOncompass Medicine, Budapest, Hungary.
Diana Bello RoufaiDepartment of Drug Development and Innovation (D3i), Institute Curie, Paris & Saint-Cloud, France.
Richard SchwabOncompass Medicine, Budapest, Hungary.
Celia DupainDepartment of Drug Development and Innovation (D3i), Institute Curie, Paris & Saint-Cloud, France.
Istvan T Valyi-Nagy *Central Hospital of Southern Pest-National Institute for Hematology and Infectious Diseases, Budapest, Hungary. drvnistvan@gmail.com.
Christophe Le Tourneau *Department of Drug Development and Innovation (D3i), Institute Curie, Paris & Saint-Cloud, France. christophe.letourneau@curie.fr.ORCID http://orcid.org/0000-0001-9772-4686
Institut Curie · FRInserm · FRNational Center for Epidemiology · HUSemmelweis University · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Precision oncology is currently based on pairing molecularly targeted agents (MTA) to predefined single driver genes or biomarkers. Each tumor harbors a combination of a large number of potential genetic alterations of multiple driver genes in a complex system that limits the potential of this approach. We have developed an artificial intelligence (AI)-assisted computational method, the digital drug-assignment (DDA) system, to prioritize potential MTAs for each cancer patient based on the complex individual molecular profile of their tumor. We analyzed the clinical benefit of the DDA system on the molecular and clinical outcome data of patients treated in the SHIVA01 precision oncology clinical trial with MTAs matched to individual genetic alterations or biomarkers of their tumor. We found that the DDA score assigned to MTAs was significantly higher in patients experiencing disease control than in patients with progressive disease (1523 versus 580, P = 0.037). The median PFS was also significantly longer in patients receiving MTAs with high (1000+ <) than with low (<0) DDA scores (3.95 versus 1.95 months, P = 0.044). Our results indicate that AI-based systems, like DDA, are promising new tools for oncologists to improve the clinical benefit of precision oncology.

Identifiers

PMID34162980
PMCPMC8222375
OpenAlexW3175129117

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.